Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq91 127 2e-24 seq98 122 8e-23 >seq91 Length=1575054 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| |||||||||||||| Sbjct 521900 CCACCACGGAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAG 521841 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| | || || || |||||||| || ||| Sbjct 521840 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 521781 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 521780 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 521721 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || |||||||| || || ||||| ||||||||| Sbjct 521720 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATG 521673 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | || || || | || | || |||||||| || ||||| || ||||| Sbjct 522639 GCCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCT 522580 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || | |||||| || ||| |||| | ||||||||| || || || Sbjct 522579 CAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGG 522520 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || || ||| | | || | ||| || | ||||| | Sbjct 522519 AATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAAC 522460 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || |||||||||||||| Sbjct 522459 CTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || || ||||| ||||||||||| ||| Sbjct 522410 CCACCACGAAGACGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 522351 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| || |||||||| || |||| | ||||| || ||||| || Sbjct 522350 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGA 522291 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||||||| ||||||| Sbjct 522290 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACT 522231 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || || || || ||||| || ||||| Sbjct 522230 TCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | ||| || ||||| || |||||||| ||| Sbjct 522182 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCA 522123 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || ||||| || || | || | ||||||||||| |||||| Sbjct 522122 AGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 522063 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | ||||||| ||||||| Sbjct 522062 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGACC 522003 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | || | ||| || || || || || || |||| Sbjct 522002 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 521966 >seq98 Length=1093051 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| || |||||||| |||||| Sbjct 289145 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 289086 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 289085 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 289026 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 289025 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 288966 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || || || |||||||||||||| Sbjct 288965 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCAT 288919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011885475200