Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq98 93.3 3e-14 seq91 86.0 5e-12 >seq98 Length=1093051 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||| || ||| | | ||| Sbjct 289130 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 289071 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 289070 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 289011 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | |||| || | |||||| || Sbjct 289010 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 288951 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || || || || ||||| ||||||||||| ||| Sbjct 288950 TTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTTG 288915 >seq91 Length=1575054 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||| |||||| || ||| | || ||||| || Sbjct 522614 TGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGC 522555 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 || || || | ||||| ||||| || || || | |||||| || || ||| ||| Sbjct 522554 TTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTG 522495 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 || |||||| | | | | |||||| | | ||| || | ||||||||| ||||| || Sbjct 522494 CT-CTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGT 522436 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || || || ||||||||||| Sbjct 522435 GAGAGTCTTCACGAAAATCTGCAT 522412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || || ||||| || ||||||||||||| | ||| | | ||| Sbjct 522395 AGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCC 522336 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 || | ||| ||||| ||| | || || |||||||| ||| || | ||||| |||| | Sbjct 522335 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCC 522276 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||||| |||||| | | | || ||| | ||| ||||| || ||||| Sbjct 522275 TGGATCTTGCT-CTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGT 522217 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || ||||| || || ||||| Sbjct 522216 CTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087234763450