Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq91 96.9 3e-15
>seq91
Length=1575054
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || ||||| | ||||| || ||||||| |||| || |||||
Sbjct 521671 ACCATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCT 521730
Query 25056 TCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
|| ||||||||||| || || ||| | || | ||| ||||| || || || || ||
Sbjct 521731 TCCGACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCCCCC 521787
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
||||| || || | ||||| |||||||| || | || || | |||||| | |||
Sbjct 521788 GACCAGCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGAT 521847
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| ||||| || || || || || ||| | || ||
Sbjct 521848 TACAACATTCAGAAGGAGTCTACTCTTCATCTTGTTCT 521885
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || || ||||||| | || || ||||| |
Sbjct 522412 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 522471
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| ||||| || || || || || || ||||| ||||| ||
Sbjct 522472 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAG 522531
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| || || || || || || ||||||| |||||| || |||| || ||
Sbjct 522532 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAAC 522591
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || || || || ||
Sbjct 522592 ATCCAGAAGGAGTCAACTCTCCA 522614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327181416325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |