Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq114 140 4e-28
>seq114
Length=1428553
Score = 140 bits (154), Expect = 4e-28
Identities = 366/558 (66%), Gaps = 3/558 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| || || | ||| ||||| || || || | ||| || ||| || |
Sbjct 112813 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 112754
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || || || || |||| || ||
Sbjct 112753 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAA 112694
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || || || || || | ||||| |||||| | | |||
Sbjct 112693 GATACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTG 112634
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
||||||| | ||||| || || || || || || || | || || || |||||
Sbjct 112633 GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 112574
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| ||||| ||||| | | | || || || || ||||| | || || || |
Sbjct 112573 GAAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGT 112514
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
|| || || | |||||||| || ||||| ||||||||||| | ||| || | |||
Sbjct 112513 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGAT 112454
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
||| || || | |||| ||| ||||| || || ||||| |||||||| || || ||
Sbjct 112453 CTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGC 112394
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567
|| ||||| | || || | || | |||||| | | | | || | |||
Sbjct 112393 GAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCA 112334
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
||| ||||| || || || || | || || ||||||| || || || || || ||
Sbjct 112333 GTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTT 112274
Query 93628 TTTGTACATATCCCATAT 93645
|||||||| | ||| ||
Sbjct 112273 CTTGTACATTTGCCAAAT 112256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859721082200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |