Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq114 122 2e-22
seq46 107 4e-18
seq43 93.3 9e-14
>seq114
Length=1428553
Score = 122 bits (134), Expect = 2e-22
Identities = 270/403 (67%), Gaps = 8/403 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| |||||||||||||||||||| |||
Sbjct 113079 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTG 113020
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||| | |||||| || || | || || || || || ||||| |
Sbjct 113019 GCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAGGAGACGATCAGCGACGAACTCAATG 112960
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || |||||||||||||| | | ||| |||| |||||| || |
Sbjct 112959 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGG 112900
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| |||| ||| ||| || || || | || | | ||| ||| | | | |
Sbjct 112899 AACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTGAATCATCTGCTTGCTGGCA 112840
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| || || || | |||| ||||| | |||| | ||| |||||||||||
Sbjct 112839 CGGC----CCTTTAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTC 112784
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
||| ||||| |||||| || | ||| |||||||| | ||||| ||| |||||||
Sbjct 112783 ACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 112724
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||| || | | |||| ||| ||| | | |||||| |||
Sbjct 112723 GAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACA 112681
>seq46
Length=599880
Score = 107 bits (118), Expect = 4e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 203446 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 203387
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| |||||||||| | || |||||||| ||||||||| || |
Sbjct 203386 CAGACTCATCTCCGTCTCAAGCGTGGTCAGCGTTATGGTCTTTGCGGTCCCAACGGTTCC 203327
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| |||||| ||||||||||| |||| ||| | || || || ||||| |||
Sbjct 203326 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 203268
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
||||| | ||| || | || ||||||||| | ||||||
Sbjct 203267 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCC 203225
Score = 102 bits (112), Expect = 2e-16
Identities = 168/240 (70%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211
||| || ||| || |||| ||||| || ||||| ||||| || |||||||| || |||
Sbjct 202639 TCTCTGGGCTCCCGTATTGCCGTCATCGGCCCCAACGGTGCTGGCAAGTCTACTCTGATC 202580
Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271
|| || || ||||| ||| | ||||| |||| | | |||| |||||
Sbjct 202579 AACGTGCTCACTGGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATC 202520
Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331
|| || || ||| | |||||||||||| |||||||| |||||||| |||| ||||
Sbjct 202519 CGTATCGCCTACATTAAGCAGCACGCTTTCGCTCACATCGATAACCACCTTGACAAGACT 202460
Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
||| | | ||||| || ||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 202459 CCTTCCGAGTACATCCAATGGCGAT-TCCAGACTGGTGAGGATCGTGAGACTATGGACCG 202401
>seq43
Length=1019402
Score = 93.3 bits (102), Expect = 9e-14
Identities = 140/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754
||| ||||| || || || |||||||||||||||||||| || | || || || || |
Sbjct 642794 AGTTGGTTCCCTTTCTGGAGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCTATGCTCCA 642735
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814
||||||||| || ||||| || || || || || ||||| | || ||||| | ||
Sbjct 642734 GCGTGCCGACGTTCTACTTCTGGACGAACCTACTAACCATCTTGATGTTGCCAACATCGC 642675
Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872
||||| | | |||||| | ||||| | || | | |||||||| ||||||
Sbjct 642674 TTGGCTCGAGAACTACCT--CAAGTCTCATCCCGATATCACCAGTCTCATTGTTTCTCAC 642617
Query 279873 GACTCTGGCTTCCTAGA 279889
||||| || ||||| ||
Sbjct 642616 GACTCCGGATTCCTGGA 642600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834758780355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |