Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq114 351 2e-91 seq67 327 2e-84 >seq114 Length=1428553 Score = 351 bits (388), Expect = 2e-91 Identities = 592/845 (70%), Gaps = 18/845 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||| || |||||||||||||| ||||||| Sbjct 112265 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTCTCCAAGGAT 112324 Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423 || |||| | || ||| ||| | || |||| ||| || |||| | Sbjct 112325 CTCCACGACTGGAA--CAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCTCACATCC 112382 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | || |||||||| |||||||| || || ||||| |||||||| | | | |||| Sbjct 112383 TTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTG 112442 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 ||||| ||| | ||||| || || ||||||||||||||||| || |||||| Sbjct 112443 GCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACA 112502 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603 | ||||| ||| ||| || || || |||| || ||| ||| |||| | |||| | Sbjct 112503 TTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAA 112562 Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 | || ||||| ||||| ||||| || ||||||||| |||||||| |||||||| Sbjct 112563 CCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCA 112622 Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 || |||||| | | ||| | | || | | | | || || || || | || | Sbjct 112623 TCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTG 112682 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 | ||||| ||||||||| || ||||||||||| || |||||||||||| || ||| Sbjct 112683 TTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTC 112742 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || ||||| || || |||||||| ||||| |||||| | |||||||| || || | Sbjct 112743 TC-ATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACT 112801 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCT-CAGGCACAAGCCCTCGAAGGAGCGGGT 42901 ||||||||||||||||| ||| ||||| ||| | ||| | ||| || | | Sbjct 112802 GACTTTGCCTGCCTCCTCCACTC---TCACCTAAAGGGCCGTGCCAGC-AAGCAGATGAT 112857 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | | |||||||| || ||||| || || ||||||||||||| || | || || Sbjct 112858 TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCC 112917 Query 42962 C-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 | ||| |||| ||||||||||| ||||||||| ||||||| ||| |||||| | Sbjct 112918 CTGTG-CCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTG 112976 Query 43021 ACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 | | ||||| ||| | ||| || | ||||||| | | |||||||||| Sbjct 112977 ATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGAC 113035 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139 || ||||| |||||||| | | |||||||||||||| ||||||||||| || |||||| Sbjct 113036 TTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGAC 113095 Query 43140 TACCA 43144 ||||| Sbjct 113096 TACCA 113100 >seq67 Length=1756221 Score = 327 bits (362), Expect = 2e-84 Identities = 886/1342 (66%), Gaps = 39/1342 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||||| ||| | || || Sbjct 1590740 GTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGG 1590799 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||||||||| ||||| | || || ||||| ||||| || | | Sbjct 1590800 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAG 1590859 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || |||||||| | | |||||| ||| || || || | | ||||||||| Sbjct 1590860 GAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGCCTCCCAGTCCCA 1590919 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | | | ||||| | | |||| ||||||||| ||||| || | |||| Sbjct 1590920 GAGGTC--AGAGGGCTTGACGTT-------CCACATGTCGAACTGGAGAATACCCTCAGA 1590970 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388 | ||||| |||| | |||| | ||||||||| || || ||||||| || | Sbjct 1590971 GGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGC 1591030 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || ||| || |||| || |||||||| |||||| ||| || | || || |||| | Sbjct 1591031 AGT-GAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGCTCACGAGCCTCGG 1591089 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | | |||||| |||| || | ||| | ||||| || ||||| || || | | Sbjct 1591090 GGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGAC 1591149 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567 | ||||||| ||| ||| |||| | || | || | || || ||||| ||| | Sbjct 1591150 CAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCACA 1591208 Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAA 244626 ||||| | |||||| |||||||| | | || | ||| ||| | | |||| || || Sbjct 1591209 TCGATGATCTTGTTCAGGTTGCGAATAA-CAACCTGACTGACCTTGTGCAGCTTCTTGAA 1591267 Query 244627 GTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCT 244686 |||||| | | | || ||| | || ||| | | | || | || Sbjct 1591268 GTCGTA---GCAAGCCTCATCGTAGTTGATGA-----AGGAGGGCAGAGATAGAGA---- 1591315 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||| |||||||||||||| ||||| || | | ||||| || ||| || ||||| || Sbjct 1591316 GGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAG 1591375 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 || || |||||| || |||| || || || |||| ||||||||| ||||| Sbjct 1591376 ATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTT 1591435 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 |||||||||||| || |||||||| |||||| | || | | || ||| || | Sbjct 1591436 GTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTT 1591495 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | |||||||| |||| ||||| |||||||| | |||||| |||||| ||||| Sbjct 1591496 CTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTC 1591555 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986 |||||| || || ||| | ||||| |||||| |||||||| || |||| Sbjct 1591556 GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGTCCA 1591615 Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046 || ||| | || || | || |||||| || || |||||||| ||||| |||| || Sbjct 1591616 GTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAG 1591675 Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106 ||| | || | ||| ||| || |||||| | || || | || || ||||| Sbjct 1591676 GTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGAC 1591735 Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 ||| |||||| ||||| | ||||| || | || ||||| ||||||||||| ||||| Sbjct 1591736 ATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTG 1591795 Query 245167 GTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 ||| | ||| | ||||| |||||||| || || |||| || | ||||| | Sbjct 1591796 GTCGA-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCG 1591851 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACAT 245280 | |||||||| || |||||| | ||| | | | | | | ||| || || Sbjct 1591852 ATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACAT--TCAG 1591909 Query 245281 GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340 || | || || || ||||||||| | ||| ||| |||||| || || || || Sbjct 1591910 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCC 1591969 Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCT 245400 ||| || ||||| |||||| | | || ||||| || |||| ||||||| ||| | Sbjct 1591970 CTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGT 1592029 Query 245401 GCACGAGTTGAACAGAGTGGGG 245422 || | ||||| || |||||| Sbjct 1592030 GCCGGCATTGAAGAGCGTGGGG 1592051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337370342800