Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq98 98.7 1e-15
seq96 93.3 5e-14
>seq98
Length=1093051
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || ||| || || | || || |||||||| ||||| ||
Sbjct 289110 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 289051
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||||||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 289050 GATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 288992
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || ||||| || | ||||| || || || || || ||||| |
Sbjct 288991 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 288932
Query 42196 CAAAGATTTGCATTTT 42211
| || || ||||| ||
Sbjct 288931 CGAAAATCTGCATCTT 288916
>seq96
Length=874474
Score = 93.3 bits (102), Expect = 5e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || | ||||| || | || || || |||||||||||||| |
Sbjct 746583 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 746642
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| |||||||| ||||| | || | || |||||||||| ||| || |||| |
Sbjct 746643 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 746702
Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198
| | ||||| || || || |||| |||||||| |||||||| || ||||| || |
Sbjct 746703 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 746762
Query 42199 A 42199
|
Sbjct 746763 A 746763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211747525200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |