Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq91 134 2e-26
seq98 111 2e-19
seq96 105 8e-18
>seq91
Length=1575054
Score = 134 bits (148), Expect = 2e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| || || ||||| || || |||||||| |||| ||
Sbjct 521882 ACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCA 521823
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| |||||||| |||||||||| || | || ||||||||||
Sbjct 521822 AGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 521763
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | |||||| || || || || | |||||||| |||
Sbjct 521762 ATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 521703
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || ||||| |||||
Sbjct 521702 CCGGTTAGGGTCTTGACGAAGATCTGCAT 521674
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| ||||| ||||| |||||||||| || || || |||| ||
Sbjct 522164 ACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCC 522105
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| || || || |||| |||||||||||| | || | | |||||||||| |
Sbjct 522104 AGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 522045
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | || ||| ||| || || || | |||||||| |||
Sbjct 522044 ATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTG 521985
Query 46565 CCCGTCAGCGTTTTAAC 46581
|| || || || || ||
Sbjct 521984 CCAGTGAGGGTCTTGAC 521968
Score = 93.3 bits (102), Expect = 5e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | |||||| || | ||| ||||| || || ||||||||||| ||||| || |
Sbjct 522399 ACGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCC 522340
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || || |||||||| || || || | ||||| || || | || | | ||||||
Sbjct 522339 ATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTT 522280
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| |||| | | | | || ||| || || || |||| || ||
Sbjct 522279 GTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 522220
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || || || || |||||||||||
Sbjct 522219 GGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184
>seq98
Length=1093051
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || ||||| | || |||||||||||||| || ||
Sbjct 289110 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 289051
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | || |||||||||| |||||| ||||| |||
Sbjct 289050 GATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 288992
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| || | ||||| || || || || || || || |
Sbjct 288991 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 288932
Query 46581 CAAAGATTTGCATTTTGC 46598
| || || ||||| ||||
Sbjct 288931 CGAAAATCTGCATCTTGC 288914
>seq96
Length=874474
Score = 105 bits (116), Expect = 8e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| ||||| || | || ||||| ||||| || ||||| |
Sbjct 746583 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 746642
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||| ||||| | || | || |||||||||| |||||| ||||| |
Sbjct 746643 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 746702
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | |||||||| ||||||||||| || || || |
Sbjct 746703 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 746762
Query 46584 A 46584
|
Sbjct 746763 A 746763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237304850600
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