Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq81 325 5e-84
seq85 89.7 7e-13
seq57 86.0 8e-12
>seq81
Length=2238694
Score = 325 bits (360), Expect = 5e-84
Identities = 990/1529 (65%), Gaps = 27/1529 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | | ||| || || || || || ||
Sbjct 88591 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 88650
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| ||||| |||||| | ||| || || | | |||| || |
Sbjct 88651 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 88710
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||||| |||||| | || | |||||| || |
Sbjct 88711 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACA 88770
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | |||| ||| |
Sbjct 88771 CCACGGGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 88830
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| | ||| ||||| || ||||| | || || |||| || || ||
Sbjct 88831 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 88890
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | || || || || || | || |||| | ||||
Sbjct 88891 GTGGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 88950
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || ||||| || || | || || ||| | ||||
Sbjct 88951 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACATC---GAGAAGCAGG 89007
Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036
||| | || || |||| |||| | | || ||||| |||||
Sbjct 89008 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACG 89061
Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096
| || ||||| || || |||||||||||||| || | || || | || || |||||
Sbjct 89062 GCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 89121
Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156
|| || || | | | | || | ||||| || || ||||||||||| | ||
Sbjct 89122 AAGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACA 89181
Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216
|| || | || || || |||||||| | ||| ||| ||||| || |
Sbjct 89182 ATCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGG 89241
Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276
||| ||||| | ||| || || ||||| ||||| |||||||| ||||| ||
Sbjct 89242 ATAGTGGATCGGAAAAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTG 89301
Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336
||||| |||| || ||| | | || ||||| || || | || || || | |||||
Sbjct 89302 TAGAAGTCAATACCCTCGAAGAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAA 89361
Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396
| |||||||| || ||||| || || ||||| | ||| || ||||| || ||| |
Sbjct 89362 AGTGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGGGCGCGGACGTTGGTG 89421
Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456
| || ||||| || || | || || || | |||||| | || |
Sbjct 89422 CTCAAGTCCTTCTTGTGCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTG 89481
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 89482 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 89541
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | | | || ||||| || ||||||||||| || || || || || |||
Sbjct 89542 TCCTCAATAGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 89601
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| || |||||||| || || || || || || || ||
Sbjct 89602 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 89661
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| ||||| || ||| ||| || || || || | ||||| || || ||||| ||
Sbjct 89662 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 89721
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| |||||||| |||||||| ||||| || || || |||| |||| ||| |||||
Sbjct 89722 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 89781
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | || ||| ||||| || | ||| | || ||||| || | |
Sbjct 89782 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 89841
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| || || || || || || || || || || |||| ||| || | | |
Sbjct 89842 AAAGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 89898
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
| | ||| | | | | ||||||||| | || |||| ||| | |||||| |
Sbjct 89899 ACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGCGTCGGCAAACTTGCGA 89958
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | ||||| || || || || ||||| | ||||||||| || |||||||||
Sbjct 89959 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATAGCGACTTGGTTCTTG 90018
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || || || ||||| | || ||||| |||
Sbjct 90019 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 90075
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || |||||||| || || || ||
Sbjct 90076 CGGTTACCCTGGTCGTTGGCGATGATATC 90104
>seq85
Length=1093511
Score = 89.7 bits (98), Expect = 7e-13
Identities = 167/243 (69%), Gaps = 3/243 (1%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | || || || || ||||| || ||| || ||||| ||
Sbjct 786235 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATGCC 786294
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| ||||| | | || ||||| || ||||||||||| || || ||| || |
Sbjct 786295 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAAACGATGA- 786353
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| || | || | | | |||| || |||||||| |||||||| || || || || ||
Sbjct 786354 -TTTGTCGC-TCACCATCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 786411
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | || || ||| ||| || || ||||| | | ||||| || || || |||||
Sbjct 786412 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTAGCCTGTCG 786471
Query 7696 TTG 7698
||
Sbjct 786472 CTG 786474
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || |
Sbjct 786530 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 786589
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| |
Sbjct 786590 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 786649
Query 7824 TC 7825
||
Sbjct 786650 TC 786651
>seq57
Length=759348
Score = 86.0 bits (94), Expect = 8e-12
Identities = 190/280 (68%), Gaps = 4/280 (1%)
Strand=Plus/Minus
Query 22490 CTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGA 22549
||||||||| || | || | || ||||| |||||||||| || | || |||
Sbjct 91914 CTCCACAAACAGAGGAGACCACCTTCCACCCGGTATCACCATATGCTGTCACGAAGTTGT 91855
Query 22550 TGGGATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTA 22609
| || ||| | || || || | | |||| ||||||| | ||| | |||||||
Sbjct 91854 TCCAGTACTGGACTACTGTCAACTTTCGAGAGGCATACGGCTTCCATGCCTCGAATGGTA 91795
Query 22610 TAATGTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAAC-A 22668
| | |||||||| |||||||| ||||| ||| | ||||| || ||||| || || |
Sbjct 91794 TTCTCTTCAACCATGAATCACCAAGACGAGGTACCACTTTCGTCACCCGAAAGATCACTA 91735
Query 22669 CTCG-GTGTCGCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGA 22727
||| ||| | |||| | ||| || || | ||| ||| | || || || |||||
Sbjct 91734 CTCAAGTGGCTTTAATTGCT-TGC-GGAAAGTTAGAATTTTTCTCTCTAGGAAATCTAGA 91677
Query 22728 TGCGAAACGAGATTGGGGTCATGCACGCGATTACGTGAAA 22767
||| ||||| |||||||||||| |||||| || ||
Sbjct 91676 TGCTGTCCGAGACTGGGGTCATGCAAAGGATTACATGCAA 91637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131569430200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |