Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq67 214 2e-50 seq114 150 2e-31 seq106 82.4 9e-11 >seq67 Length=1756221 Score = 214 bits (236), Expect = 2e-50 Identities = 1109/1751 (63%), Gaps = 55/1751 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||||| || | | |||||| || || ||||| || || Sbjct 1592159 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1592100 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || |||||| | | |||| || || | || || ||||| Sbjct 1592099 CTTGGAGACATACAACCTGATGTCAAGCAAGTTCTTCACGCATGCTTCCCCCACGCTCTT 1592040 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || || || || |||||| |||| ||| ||| | ||| | ||||| || Sbjct 1592039 CAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 1591980 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||||||| |||||| ||||| ||| |||||| Sbjct 1591979 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 1591920 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||| || || | | || | || | || | | ||| || | | ||||| Sbjct 1591919 TGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACT--GGCTCATACATCGCCGGTACC 1591862 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || ||| Sbjct 1591861 AACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTAT 1591802 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || | || |||| || ||||| ||| Sbjct 1591801 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 1591745 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 1591744 CACTCCGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGT 1591685 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| || || ||||| || ||||| ||||||||| | |||||| || Sbjct 1591684 GCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAG 1591625 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || | ||| | || | || || | || || || ||| |||| | || Sbjct 1591624 AACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGA 1591565 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG-----CGA 112257 |||||||| || || || ||| |||||||||| ||| ||||| | | || Sbjct 1591564 GAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-----AAGGCGGGCAAGGGTCGCAAGA 1591510 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | | || | || | | ||| | || ||||| || | || || ||||| || | Sbjct 1591509 CGAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAAC 1591451 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 |||| ||||| ||||| || ||||| |||| |||||||| |||||||| | ||| Sbjct 1591450 CCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACC 1591391 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || ||||| || || || ||||| | || | | | || ||| || Sbjct 1591390 ATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCC 1591331 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || || ||||| || || | |||| ||| | | || || | || || Sbjct 1591330 GTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTT 1591276 Query 112497 -----GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 || | | || || ||| | || | | ||| | ||||| |||| Sbjct 1591275 GCTACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 1591216 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | || ||| || ||||| || || ||||| || ||| ||| | ||||| | Sbjct 1591215 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 1591156 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 112670 | |||||||| ||||| || ||||| || |||| ||| || || || ||| | || Sbjct 1591155 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 1591097 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || ||| ||| || || ||||| || || |||||||| || |||||||| || Sbjct 1591096 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATCTTTGAGACCATTTATCACGCTGCG 1591037 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || | || |||| ||| || ||||| || ||||| ||||||| Sbjct 1591036 CTCACTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 1590977 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 || || || | || | || || || || |||||| | | || || | || Sbjct 1590976 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 1590917 Query 112851 GACTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 |||||||| |||| || || | | | ||||| | || | ||||||||||| | Sbjct 1590916 GACTGGGAGGCTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTACTCC 1590859 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 1590858 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 1590799 Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028 ||||||| | || ||||| | | | ||||| || ||||| | ||||||| Sbjct 1590798 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAA-- 1590741 Query 113029 AGCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084 | || || | | ||||| || || ||||| |||||| | | ||||||| | Sbjct 1590740 --CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 1590683 Query 113085 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAG 113144 | ||| | | | |||||||||||| || ||| | || || | || | ||| Sbjct 1590682 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 1590623 Query 113145 AAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGAT 113204 |||| || |||||||| ||| | | ||| | | ||||| || ||| Sbjct 1590622 GCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGAT 1590563 Query 113205 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 113262 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 1590562 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 1590505 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATG 113321 || |||| || | ||||||| | | || | |||||| || ||||| || || ||| Sbjct 1590504 TGGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATG 1590446 Query 113322 TATTACCTCCG 113332 || ||||| || Sbjct 1590445 TACTACCTTCG 1590435 >seq114 Length=1428553 Score = 150 bits (166), Expect = 2e-31 Identities = 208/286 (73%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 102106 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 112526 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 112584 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 112585 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 112644 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | | ||||||||| | || ||| | || || || ||||||||||||||||||| || Sbjct 112645 CTC-TTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTG 112703 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || ||||| | |||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 112704 GTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 112763 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 112764 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 112809 >seq106 Length=1228412 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 163548 ATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGG 163607 |||| || |||| || ||||| ||||||||| || || || | || || | Sbjct 1193281 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1193222 Query 163608 GTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 163667 |||| || ||| |||| ||| ||| | ||||| ||| | |||||||| ||| || Sbjct 1193221 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1193162 Query 163668 AAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAG 163717 ||||||||||| ||| ||| || ||||| || ||||||||||| ||| Sbjct 1193161 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAG 1193112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741197311600