Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq67 196 6e-45
seq114 109 6e-19
seq106 87.8 2e-12
>seq67
Length=1756221
Score = 196 bits (216), Expect = 6e-45
Identities = 540/812 (67%), Gaps = 27/812 (3%)
Strand=Plus/Plus
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | |||||| || || | ||||| || || || || | |||||||||||
Sbjct 1591352 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 1591411
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||| |||||| |||||||||||||||||| | || | || ||||| ||||| |
Sbjct 1591412 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 1591471
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCT 106682
|| ||||| || | ||| | | || | | || | || | ||| | || | |||
Sbjct 1591472 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCG 1591527
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| |||||||||| ||| || || || |||||||| || ||||| ||| || |
Sbjct 1591528 CCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAG 1591587
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| || | || || | ||| | ||| | ||| || |||||| |||||||||||||
Sbjct 1591588 GGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAA 1591647
Query 106803 GGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTG 106860
| || || ||||| |||| | | ||| || || | ||| || |||| || | ||| ||
Sbjct 1591648 GATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTG 1591705
Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920
||| || | ||||||||||| | || ||| | |||||| ||||| || |||| ||
Sbjct 1591706 GTTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGC 1591765
Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| || || ||| ||| | || | ||||| || || ||| ||| || ||
Sbjct 1591766 AAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 1591825
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTA 107035
|||||||| |||| | ||| | ||| ||| || || || ||| || ||| |
Sbjct 1591826 ACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCA 1591883
Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095
| || | | | || | | || |||||||| |||||| ||| ||||| |||
Sbjct 1591884 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 1591943
Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155
|| | | ||||| | ||||| || | || ||| ||||| | | | | ||||
Sbjct 1591944 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 1592003
Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTG 107211
||| |||| || || || || || ||||||||||| || || | ||||||
Sbjct 1592004 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 1592063
Query 107212 AATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271
|| |||| | | | |||||| || ||||||||||||||| || || || || ||
Sbjct 1592064 AA-GAACTTGCTT---GACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACC 1592119
Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303
||| || | | ||||||||| | |||||
Sbjct 1592120 CCAGATACCAACAGACACACGCATGATCATGT 1592151
>seq114
Length=1428553
Score = 109 bits (120), Expect = 6e-19
Identities = 300/457 (66%), Gaps = 16/457 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| |||||||||||
Sbjct 113097 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 113038
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| || || || | || || | | | | || |||| ||||
Sbjct 113037 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 112983
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
||||||| | || |||||||||||| ||| ||||||||||| |||| ||
Sbjct 112982 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 112923
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| || || || || || |||| | | ||||| || || || | | |||
Sbjct 112922 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 112863
Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| || || | | | ||| | | || | || | || ||| || |||||
Sbjct 112862 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 112806
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| |||||||| || || || || || || || |||||| || || ||||
Sbjct 112805 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 112746
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
||||||| |||||||| | ||| |||||| | ||| | || ||||||||||||||
Sbjct 112745 TGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 112686
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434
| ||| || || |||| || || | ||| |||||
Sbjct 112685 CAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA 112649
>seq106
Length=1228412
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || ||||| ||||||||| |||||| ||| | || || |
Sbjct 1193281 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1193222
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || ||| | ||||| ||| | |||||||| || ||
Sbjct 1193221 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1193162
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 1193161 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 1193109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979656912200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |