Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq43 136 5e-27 >seq43 Length=1019402 Score = 136 bits (150), Expect = 5e-27 Identities = 326/485 (67%), Gaps = 15/485 (3%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| ||| || || | || ||| | || |||| Sbjct 224884 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 224827 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || |||| || || || || Sbjct 224826 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCAGTTTCTGCTCACGGT 224768 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | Sbjct 224767 ACCAACCCTGCTTCTGCTGCCATGGCTGGCATGAAGGTTGTTACTGTCAAGTGTGACGGC 224708 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534 | || ||| ||| | || ||| | ||||| || ||| || || | | | | Sbjct 224707 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 224651 Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594 || || | ||| ||| |||| ||||| ||||| ||||| || || | | ||| Sbjct 224650 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATC 224591 Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || | ||| | |||| || ||| |||| |||| || || | || ||||| || Sbjct 224590 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTTGTCTACATGGACGGTGCCAAC 224531 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | || || ||| | ||||| | || ||||| |||||| ||||| || ||||| Sbjct 224530 ATGAACGCTCAGATTGGTCTCTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTC 224471 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 ||| | || ||||| ||||||||||| || || || || |||||||| || || ||||| Sbjct 224470 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGCGGTCCTGGTGTTGGCCCTATC 224411 Query 159775 GGTGT 159779 | ||| Sbjct 224410 GCTGT 224406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050060650800