Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq91 98.7 6e-16
>seq91
Length=1575054
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||||||||| ||| | || |||| |||| ||| || || || ||
Sbjct 522602 TCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAG 522543
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | |||||||| || |||||| || |||
Sbjct 522542 ATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTG 522483
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | |||| | |||||| || | ||| ||||| ||||| ||||||||||||||
Sbjct 522482 TCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACG 522423
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 522422 AAAATCTGCATA 522411
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || || || || | || | || || ||||| || ||||| ||
Sbjct 521864 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 521805
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | ||||||||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 521804 ATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGAC--AT 521747
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | |||||| |||| ||| ||||| || || || || |||||
Sbjct 521746 --TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTT 521689
Query 34967 CACAAAGATCTGCAT 34981
|| |||||||||||
Sbjct 521688 GACGAAGATCTGCAT 521674
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/215 (69%), Gaps = 10/215 (5%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| || ||| ||||||||||| ||||| ||||| |||| |||| ||
Sbjct 522392 ACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 522333
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || || || ||||| || ||||| || || || | || | |||||||||||
Sbjct 522332 AGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGG 522273
Query 34893 ATCTT-CTGTT----TGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947
||||| || || | | ||| ||||| | | ||| || || | || ||||
Sbjct 522272 ATCTTGCTCTTCACATTATCAATGGTATCGGAT-----GACTCGACTTCCAGAGTAATGG 522218
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| ||||| || || ||||| || ||||| ||||||
Sbjct 522217 TCTTTCCAGTAAGGGTCTTGACGAAGATTTGCATA 522183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632986746840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |