Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq91 93.3 3e-14
seq96 82.4 6e-11
>seq91
Length=1575054
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || ||||| ||||| || || ||| |||| | || || | ||||| || |||||
Sbjct 522374 TCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 522315
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| |||||||||||||||| ||||| ||||||||||| ||||| || ||| |
Sbjct 522314 ATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTA 522255
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || | ||| || |||| ||||| || ||||| || | || || ||
Sbjct 522254 TCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACG 522195
Query 48756 AAAATCTGCAT 48766
|| || |||||
Sbjct 522194 AAGATTTGCAT 522184
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || ||||| ||||||||||| ||| | || |||| || | |||||| ||||| ||
Sbjct 521865 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 521806
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| || || || || | ||| | |||||||||||| |||||| || |||
Sbjct 521805 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 521746
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | || || || | ||| ||||| | || || || || || || | || || ||
Sbjct 521745 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 521686
Query 48755 AAAAATCTGCATCGTG 48770
|| |||||||| |||
Sbjct 521685 GAAGATCTGCATGGTG 521670
>seq96
Length=874474
Score = 82.4 bits (90), Expect = 6e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638
|| || || ||||| || || ||| |||| | || || | |||||||| || || |||
Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644
Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||||||||| |||| ||||| ||||||||||||
Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 746679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936880385065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |