Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq67 168 2e-36
seq114 156 1e-32
seq81 107 6e-18
seq75 102 2e-16
>seq67
Length=1756221
Score = 168 bits (186), Expect = 2e-36
Identities = 573/881 (65%), Gaps = 19/881 (2%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || | ||| ||| ||| || || || || |||||| || | ||||| |||||
Sbjct 1591352 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 1591411
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || | ||| || ||||||||||| || ||| ||||| |||| ||||| |||| ||
Sbjct 1591412 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 1591471
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|| ||||| ||| || | | || || || |||| |||| ||
Sbjct 1591472 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTT 1591531
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || |||| || | ||| | | | ||||| ||||| || || || ||||||
Sbjct 1591532 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 1591589
Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924
|||| || |||||| | || | ||| | || || | | |||||| ||| ||
Sbjct 1591590 CACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAA---CACGCTTCATGAAA 1591646
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| |||| ||||| ||| ||||||||| | || |||||| | |||||
Sbjct 1591647 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 1591706
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| || || || | ||| || | ||| | || ||||| || || || |||
Sbjct 1591707 TTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCA 1591766
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
||| ||| | |||| |||||||| || |||||||||||||| || |||||||||
Sbjct 1591767 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 1591826
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | ||| || || || || ||||| ||| || | || ||||
Sbjct 1591827 CGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 1591886
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220
| || | | || | || || ||||||||||| | |||| || || || || ||
Sbjct 1591887 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 1591945
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279
||| | ||||| | | || || |||||| || || | ||| | | ||| |||
Sbjct 1591946 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 1592004
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
| || ||||| || | || || || || ||||| || || || | ||||| | |
Sbjct 1592005 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 1592064
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398
| |||| | ||||| | |||||||||| | ||| | || | |||| |
Sbjct 1592065 AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 1592123
Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458
|||| | ||| || | ||| ||| ||||| || ||||| |||||| || |||||
Sbjct 1592124 ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATC 1592183
Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| ||||||| || |||| ||| || || || || ||
Sbjct 1592184 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 1592224
>seq114
Length=1428553
Score = 156 bits (172), Expect = 1e-32
Identities = 351/523 (67%), Gaps = 6/523 (1%)
Strand=Plus/Plus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || ||| || || || | ||||| |||||| || || || || || |
Sbjct 112458 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 112517
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424
| || || || || || || ||||| || ||| |||| | | || |||||||
Sbjct 112518 ACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAACCTACCTTTTCAACG 112577
Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||||| | || |||| || || |||||| |||||||||| || |||||||||
Sbjct 112578 CCATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA 112636
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|| ||| | ||||| |||||||||||||| |||| || ||||| || ||
Sbjct 112637 GATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTC 112696
Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
||||||||||| ||| ||||||||| ||||| || ||||||||| | | ||||| |||
Sbjct 112697 TTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTG 112756
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663
|| |||||||| || || || | ||||||| |||||||| || |||||| |
Sbjct 112757 ACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTC 112816
Query 133664 CTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAA 133723
|| |||||| | || || | | || ||| | | |||| |||| || || | ||
Sbjct 112817 CTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGAT 112876
Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTA 133781
|| || ||||| || || ||| | ||||| || ||||| || | || |
Sbjct 112877 GCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTT--CTCGGCA 112934
Query 133782 TGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824
|||| || || ||| ||| || ||||| || || |||||
Sbjct 112935 TGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGA 112977
>seq81
Length=2238694
Score = 107 bits (118), Expect = 6e-18
Identities = 189/273 (69%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||| | || || |||||||||||||| ||| | || || || ||
Sbjct 225648 TCTTCCAGAGCCTTAACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACCGCA 225707
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690
|||||||| ||||| | |||||| |||| || |||||||| | ||| | || || ||
Sbjct 225708 GTATCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 225766
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | | | ||| |||| || || ||||| ||||| || || | ||| ||||||
Sbjct 225767 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 225826
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| || | || | | || | ||| | || |||||||| || ||||| | ||
Sbjct 225827 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 225886
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
||| || | || | |||| || ||||||||
Sbjct 225887 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 225919
Score = 89.7 bits (98), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||
Sbjct 224871 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 224927
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | ||||||| |||||||||||| || || || |
Sbjct 224928 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 224987
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||| |||||||| || ||
Sbjct 224988 ACACCGACCATTTCACCAGG 225007
>seq75
Length=970793
Score = 102 bits (112), Expect = 2e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| | | ||||||| || | ||| | || ||
Sbjct 513041 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 513100
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| || ||||| || | ||||||||||||||| |||||||| |||||
Sbjct 513101 TCCTTCAGGAAAGCAGCGGCACCATGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 513160
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| ||||||||||| ||||| | |||||| ||||||| || ||
Sbjct 513161 CGGAGACCACCATCACGAGCACGACCCTCAACAGGCTGTCGGGT 513204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814677062235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |