Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq81 154 1e-31
>seq81
Length=2238694
Score = 154 bits (170), Expect = 1e-31
Identities = 702/1102 (64%), Gaps = 17/1102 (2%)
Strand=Plus/Plus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| ||||| ||| || ||||| ||| || || || |||| | || || |
Sbjct 88665 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 88724
Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499
||||| |||||||| | ||| || ||||| |||||||| || || || | | |||||
Sbjct 88725 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACACCACGGGGGGCAGG 88784
Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559
||||| || | | || | |||| || || || || ||| || || ||
Sbjct 88785 AGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGTTGACGCTC 88844
Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619
||||||| | | |||||| ||| ||| || || || || | || | || ||
Sbjct 88845 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 88904
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
||| || || ||| || || ||||| | |||| |||||||| |||||||||||
Sbjct 88905 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 88964
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| ||||| || || | |||||| | || | || | || | | ||
Sbjct 88965 GGTCTCGATACCGAGAGAGAGGGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 89024
Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796
| | || | ||| ||||| || || || | || ||||| || |||||||| ||
Sbjct 89025 GCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 89084
Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856
||| || || | | | || | | || || ||||| | | | | || | |||
Sbjct 89085 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 89143
Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915
|| || ||||| | ||||| || || | ||||| || || || | || || |
Sbjct 89144 GGACACGGGGGATACGGGTAGATCCACCGACGAGGACAATCTCGTGGACGAGGGACTTGT 89203
Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975
| | || | || | || || ||||| | | | | || || | ||
Sbjct 89204 CGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCT 89263
Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033
|| || || ||||| ||| | || || || | || || ||||| || |||||
Sbjct 89264 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 89321
Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093
| ||| |||| || |||| || |||| || ||||| |||| || || ||||| ||
Sbjct 89322 GAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAAAGTGTTCGCTTGGCACGCTC 89381
Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGAT--TCAAATCTGTTTTAT 282149
|| || || | || | ||| | ||| || || ||| | |||| || | || |
Sbjct 89382 GCAAGCAGTTCGGAGACGTCGCAGGGC----GCGGACGTTGGTGCTCAAGTCCTTCTTGT 89437
Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209
||||||||||| || | || | | || ||||| || || || || ||||| |
Sbjct 89438 GCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCAC 89497
Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269
|||| | ||| | || | |||| | || | ||| | || || |||| || | |
Sbjct 89498 CCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATAGTAAGGA 89557
Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329
||| ||||| ||| |||||||| | ||| || || || || || || ||
Sbjct 89558 GAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAA 89617
Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| || |||||||| || |||| || |||||||| || || || ||||||| | ||
Sbjct 89618 CCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCGTTGATAATTCGGAGAA 89677
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| || ||||| || || || ||||| || |||||||| | || |||||||| || |
Sbjct 89678 CGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGT 89737
Query 282450 ATGCAGGAACAGTAATAACGGC 282471
| ||||| ||||||| ||||||
Sbjct 89738 AGGCAGGGACAGTAACAACGGC 89759
Score = 98.7 bits (108), Expect = 7e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| || |||||| || | || || |||||||| ||||||||||| | || ||||||
Sbjct 227197 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 227138
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | ||| || |||| | || |||||||| |||| || ||||
Sbjct 227137 ACTGTCATTACTGGTGATGCCAATCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 227078
Query 432408 GC 432409
||
Sbjct 227077 GC 227076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740622790155030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |