Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq91 102 2e-16 >seq91 Length=1575054 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| | || || || | |||||| |||| Sbjct 522427 AAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGTGACACTATCGACAAC 522486 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || ||| || || || | ||||||||| Sbjct 522487 GTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAGCAGCGTCTTATCTTC 522546 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||||||||| | || || ||| || ||| ||||||| ||||| Sbjct 522547 GCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAACATCCAGAAGGAGTCA 522606 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||| | ||||||| Sbjct 522607 ACTCTCCACCTCGTTCTCCGACTTCG 522632 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || || || ||| ||| Sbjct 521677 CAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 521736 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || ||| ||| Sbjct 521737 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAA 521796 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | || |||||||| |||||| | || || || | ||| | | ||||||||| | Sbjct 521797 CGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAACATT 521856 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| |||||||||||||| |||||| Sbjct 521857 CAGAAGGAGTCTACTCTTCATCTTGTT 521883 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||| ||||| ||||| ||||||| |||||||| || || Sbjct 522632 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTG 522573 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||| |||||| || ||||||||||| || || ||| Sbjct 522572 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGA 522528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818452977755