Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq98 102 7e-17
seq91 100 3e-16
>seq98
Length=1093051
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || ||| || | || || |||||||| || |||||
Sbjct 289110 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 289051
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | || | || |||||||||| |||||| ||| | ||
Sbjct 289050 GATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 288992
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || |||||||| | |||||||| || || || | || || |
Sbjct 288991 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 288932
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 288931 CGAAAATCTGCAT 288919
>seq91
Length=1575054
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| ||||| | |||||| |||| ||||| ||||| || |||||
Sbjct 522146 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAA 522087
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | ||| | | |||||||||| |||||| ||| | | |
Sbjct 522086 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTG 522027
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| ||| || ||||| | ||||| || || || || | || || ||
Sbjct 522026 TCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 521967
Query 35726 AATAT 35730
| |||
Sbjct 521966 ACTAT 521962
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| |||||||||||||| | | || || |||| || |||||||| || || ||
Sbjct 521865 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 521806
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| || |||||||| | || | || |||||||||| ||||| ||| | | |
Sbjct 521805 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 521746
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||| | ||||| || || || || | || || ||
Sbjct 521745 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 521686
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 521685 GAAGATCTGCAT 521674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792726587400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |