Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq114 104 7e-17 >seq114 Length=1428553 Score = 104 bits (114), Expect = 7e-17 Identities = 348/531 (66%), Gaps = 17/531 (3%) Strand=Plus/Plus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 ||||||||||| ||||||||||| | ||| |||||| | || || || | |||| Sbjct 112301 GAGGAGATTGACCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAG 112360 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 | | |||||| | |||| | || ||||| || | || ||||| ||| Sbjct 112361 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAAC 112417 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 ||||| || || ||| ||| | ||| | | ||||||| || | |||||| Sbjct 112418 GAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTAC 112477 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | ||||| | ||||||||||||||| ||||| |||| | | ||| | || Sbjct 112478 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACAC- 112536 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCC 443641 ||| || || || || ||||| || | ||| ||| || ||| ||||| || Sbjct 112537 CTATATC--AAGGAGCCCGCCCAGCGAACCTACCTTTTCAACGC-CATTGAGACCATTCC 112593 Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700 ||||| | ||| || |||||| | | ||| || || || || ||| | | Sbjct 112594 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA-GATAAGGACTCTTCCT 112652 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | | | || || || ||||| |||| || || || | || || || || || || Sbjct 112653 TTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCTTC 112711 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 ||||| || |||||| | || |||||||| || |||| ||||||||||| |||||| Sbjct 112712 GCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAG 112771 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || ||| ||| ||||||||| | || ||||| ||||| || ||| || Sbjct 112772 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 112822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588332845663975