Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq114 104 7e-17
>seq114
Length=1428553
Score = 104 bits (114), Expect = 7e-17
Identities = 348/531 (66%), Gaps = 17/531 (3%)
Strand=Plus/Plus
Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408
||||||||||| ||||||||||| | ||| |||||| | || || || | ||||
Sbjct 112301 GAGGAGATTGACCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAG 112360
Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465
| | |||||| | |||| | || ||||| || | || ||||| |||
Sbjct 112361 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAAC 112417
Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525
||||| || || ||| ||| | ||| | | ||||||| || | ||||||
Sbjct 112418 GAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTAC 112477
Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585
| ||||| | ||||||||||||||| ||||| |||| | | ||| | ||
Sbjct 112478 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACAC- 112536
Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCC 443641
||| || || || || ||||| || | ||| ||| || ||| ||||| ||
Sbjct 112537 CTATATC--AAGGAGCCCGCCCAGCGAACCTACCTTTTCAACGC-CATTGAGACCATTCC 112593
Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700
||||| | ||| || |||||| | | ||| || || || || ||| | |
Sbjct 112594 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA-GATAAGGACTCTTCCT 112652
Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760
| | | | || || || ||||| |||| || || || | || || || || || ||
Sbjct 112653 TTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCTTC 112711
Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820
||||| || |||||| | || |||||||| || |||| ||||||||||| ||||||
Sbjct 112712 GCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAG 112771
Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871
|| ||| ||| ||||||||| | || ||||| ||||| || ||| ||
Sbjct 112772 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 112822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588332845663975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |