Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq67 226 4e-54 seq114 118 1e-21 seq106 87.8 2e-12 >seq67 Length=1756221 Score = 226 bits (250), Expect = 4e-54 Identities = 1131/1765 (64%), Gaps = 65/1765 (4%) Strand=Plus/Plus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TG 110412 |||| || || || |||||||| || |||||||| || | ||||| || | || | || Sbjct 1590426 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTG 1590484 Query 110413 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTT 110470 |||| | || |||| |||||| || | |||| || ||||| ||| |||| Sbjct 1590485 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACT- 1590543 Query 110471 TGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATT 110527 | ||||||||| || || | || ||||| | | ||| || || | || Sbjct 1590544 -GATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGAC---CTGGCGCTGAGAGATC 1590599 Query 110528 TCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATG 110587 |||||||| || ||| ||| ||||| ||| | ||||| | | || ||||| ||| Sbjct 1590600 TCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATG 1590659 Query 110588 GAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTG 110647 ||||| | | | ||| | | ||||||| | | |||||| ||||| || | Sbjct 1590660 GAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACA 1590719 Query 110648 AGGTCATTGA----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCT 110703 ||||| |||| | ||| | ||||||| |||||||| ||||| | | Sbjct 1590720 AGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCGAGAACACGGCG 1590775 Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 ||||||| || | ||||| || || ||||| || || || |||| || || | ||| Sbjct 1590776 TTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGT 1590835 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 ||| || ||||| || || | | ||||||||||| | || | ||||| | Sbjct 1590836 ACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CT 1590893 Query 110824 TTC-CTTGA-GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAA 110879 | | || || || | |||||||| || | || || || || |||| ||||||| | Sbjct 1590894 TCCTCTCGAAGAGCCTCCCAGTCCCAGAGGTCAGAG-GGCTTGACGTTCC-ACATGTCGA 1590951 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 |||| || | || | || ||||| ||||||| ||||| |||| ||| | | | Sbjct 1590952 ACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCT 1591011 Query 110940 CAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 ||||| | ||| | || || | |||||||| ||||| |||||||| | | Sbjct 1591012 TAGCCAGCTGCACGGAG-GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTA 1591070 Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGC 111057 || | ||| || || || || || | ||| || | || || |||| || Sbjct 1591071 TTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGC 1591129 Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117 ||||| |||||||| | |||||| |||| ||| ||||| ||| || || || || Sbjct 1591130 AAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTG 1591189 Query 111118 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 111177 || || || || || |||| ||| || || |||||| || ||| Sbjct 1591190 GACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGAC 1591249 Query 111178 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAG 111234 | || || || | | || | || || ||| || | ||| | || || Sbjct 1591250 CTTGTGCAGCTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAG 1591306 Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294 | | || || | ||||| || || ||| || | |||||| | |||||| Sbjct 1591307 AGATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTC 1591366 Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354 || || | ||||| || || || || | ||||||||||||||||| |||||| Sbjct 1591367 AGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCA 1591426 Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414 |||||||||||||||||| | || | || ||||| ||||| | | ||||| || | Sbjct 1591427 GGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTA 1591486 Query 111415 CCAAA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTG 111470 ||||| | || | | || | || | ||| | || | ||| || |||||||||| Sbjct 1591487 CCAAAGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTT 1591542 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530 ||| || || || |||||||| || ||||| ||| || || || | || | Sbjct 1591543 CGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGC 1591602 Query 111531 AGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590 | | ||| | ||| | ||| | |||||| |||||||||||||| || || ||||| | Sbjct 1591603 ACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAA 1591662 Query 111591 GGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 ||| | | ||| || || | ||| || |||| || | ||| ||||| || | || Sbjct 1591663 GGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTGGTTCTTACGGAGATC 1591720 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 ||||||||| | || ||| | |||||| ||||| || |||| || | || || ||| Sbjct 1591721 AAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCG 1591780 Query 111709 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 ||| | || | ||||| || || ||| ||| || || |||||||| |||| Sbjct 1591781 CTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAAC 1591840 Query 111766 AATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCA 111823 | ||| | ||| ||| || || || ||| || ||| | | || | | | Sbjct 1591841 GACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCAGTAGCACGGATACGG 1591898 Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 || | | || |||||||| |||||| ||| ||||| ||||| | | ||||| Sbjct 1591899 TGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTA 1591958 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | ||||| || | || ||| ||||| | | | | ||||||| |||| || Sbjct 1591959 TCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGG 1592018 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTGAATGAACATACCTTG 111999 || || || || ||||||||||| || || | |||||||| |||| | | | Sbjct 1592019 GGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAA-GAACTTGCTT-- 1592075 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || ||||||||||||||| || || || || || ||| || | | Sbjct 1592076 -GACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGA 1592134 Query 112060 GACCCGCATGAACATGTACTGTGGG 112084 || ||||||| ||||| ||||||| Sbjct 1592135 CACACGCATGATCATGTGCTGTGGG 1592159 >seq114 Length=1428553 Score = 118 bits (130), Expect = 1e-21 Identities = 302/457 (66%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 113097 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 113038 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || || | || || | | | | || |||| |||| Sbjct 113037 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 112983 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 112982 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 112923 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||| || || || || || |||| | | ||||| || || || | | ||| Sbjct 112922 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 112863 Query 122606 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 112862 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 112806 Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722 | || ||| |||||||| || || || || || || || |||||| ||||| |||| Sbjct 112805 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 112746 Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 122782 ||||||| |||||||| | ||| |||||| | ||| | || |||||||||||||| Sbjct 112745 TGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 112686 Query 122783 CCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 | ||| || || |||| || |||| ||| ||||| Sbjct 112685 CAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA 112649 >seq106 Length=1228412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 164605 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 164664 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 1193281 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1193222 Query 164665 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 164724 |||| || ||| |||| || ||| | ||||| ||| | |||||||| || || Sbjct 1193221 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1193162 Query 164725 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 164777 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 1193161 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 1193109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030783188000