Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq67 217 2e-51 seq114 170 2e-37 >seq67 Length=1756221 Score = 217 bits (240), Expect = 2e-51 Identities = 1086/1701 (64%), Gaps = 53/1701 (3%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TG 117886 |||| || || ||||||||||| || |||||||| || |||||||| | | || | || Sbjct 1590426 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCAGCC-TGCAAAGTG 1590484 Query 117887 CATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 117946 ||| || | |||| | || || | |||| || ||||| ||||| || Sbjct 1590485 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTG 1590544 Query 117947 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 118006 ||| |||||| || ||||| || ||||| | | || | | ||| ||||| Sbjct 1590545 ATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCA 1590604 Query 118007 CACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 |||||| | || || ||| | ||| | ||||| | || || || ||||| || Sbjct 1590605 AACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC 1590664 Query 118067 ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATC 118126 | | | | ||| | | ||||||| | | ||||| ||||| || | || || Sbjct 1590665 ATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTC 1590724 Query 118127 CT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGAT 118182 || | || || | |||||||| |||||||| ||||| || | | | Sbjct 1590725 CTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGT 1590780 Query 118183 AGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGG 118242 ||||||||| ||||| ||||| |||||||| ||||| |||| || |||| || || Sbjct 1590781 AGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGG 1590840 Query 118243 CTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-C 118301 | || ||||| || || | ||| || |||||||||| || | | | | | | | | | Sbjct 1590841 CAGTAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CTTCCTC 1590898 Query 118302 TTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 | || |||| |||||||| || | | || | | |||||| || |||||||| Sbjct 1590899 TCGAAGAGCCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAG 1590958 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 ||||| | || || || || |||| || || || || ||||| ||| |||| Sbjct 1590959 AATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAG 1591018 Query 118421 TT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477 | ||||| || ||| || |||||||| || || ||||| || | ||| | Sbjct 1591019 CTGCACGGAG---GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAG 1591075 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGAC 118536 | |||||| ||| || || | | || || | || || |||| || |||| Sbjct 1591076 CTCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGAC 1591134 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596 | || ||||| || ||||| || || || | ||| ||| || ||||| || || | Sbjct 1591135 CCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAG 1591194 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | || ||| |||||| | | | || || || | ||||||| ||| | | Sbjct 1591195 GGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGT 1591254 Query 118657 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC---GA 118713 | ||||| | | | || | || || ||| || | | | | | | ||||| || Sbjct 1591255 GCAGCTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGT--TGATGAAGGAGGGCAGAGA 1591309 Query 118714 TTGAC--GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 | || || || || || || | | ||| || || |||||| |||||||| || Sbjct 1591310 TAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGT 1591369 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 ||| | || || || ||||| || | ||||||||| || ||| ||| || || Sbjct 1591370 GCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGC 1591429 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 ||||||||| |||||| |||| | || ||||| || |||| || ||||| || | ||| Sbjct 1591430 ATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 1591489 Query 118892 GA-CATCGGCAGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 | | || | || | | | ||| || |||| ||| |||||||||| ||| Sbjct 1591490 AAGCTTCTGAGCCTTGATCGTCTTGCG-ACCCTTGCCCGCCTT-CTCGTACTTTTCGTAC 1591547 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009 || || || ||||| || || | || | ||| || || || || ||||| | Sbjct 1591548 AGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATA 1591607 Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 || | ||| | ||| || |||||| ||||||||||| || || |||||||| || || Sbjct 1591608 AGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCA 1591667 Query 119070 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 ||| || || || || | || || | || || || ||| | || | || Sbjct 1591668 AGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAC 1591727 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGA 119183 || | || ||| | |||||| || || ||||| | || | | || | ||| | Sbjct 1591728 TCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GT 1591785 Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 | ||| |||||| ||||||| |||||| ||| || ||||||||||| |||| || | Sbjct 1591786 TG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACA 1591844 Query 119244 CCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGA 119301 || | ||| || || || || ||| || ||| | | | || | || | ||| | Sbjct 1591845 CCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCC--AGTAGCACGGATACGGTGCA 1591902 Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361 | || ||||||||| || ||| ||| ||||| || || | ||||| | ||| Sbjct 1591903 CATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGT 1591962 Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421 |||| || || || ||| |||| | | | | |||||| |||| ||| ||| Sbjct 1591963 AGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCT 1592022 Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACAT 119479 || || || || |||||||| || || | || || ||| | | |||| ||||| Sbjct 1592023 GAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACAT 1592080 Query 119480 CTTGTCGTAGGTCTCCAAGAC 119500 | || ||| ||||||||||| Sbjct 1592081 CAGGTTGTATGTCTCCAAGAC 1592101 >seq114 Length=1428553 Score = 170 bits (188), Expect = 2e-37 Identities = 534/813 (66%), Gaps = 17/813 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| || ||||| Sbjct 113097 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 113038 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | |||| |||||||| Sbjct 113037 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 112979 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| || |||||||| |||| ||| ||| Sbjct 112978 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACA 112919 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||| |||||| || || || | ||| | || Sbjct 112918 GGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTG 112859 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| ||| | ||| || | | || | || | || ||| || |||||| || Sbjct 112858 AATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 112802 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||| Sbjct 112801 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAG 112742 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | ||||||||| | || | ||| ||||||||| ||||| || Sbjct 112741 ACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 112682 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203 | ||||| |||| |||||| | |||||||| | ||| | | ||| || Sbjct 112681 AGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCATCGGAT 112622 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGAGTTCCT 130262 ||||| | ||||| || ||| || || | ||||| || || || ||| || | Sbjct 112621 GGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGT 112562 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 || | | || || ||||| || | || ||||| || || || ||| || | Sbjct 112561 TC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAA 112503 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | |||||||| | || || ||| ||||| ||||| Sbjct 112502 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACCTC- 112445 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 | | ||| | | || ||||| ||||| ||||| || |||| || || || Sbjct 112444 GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAGC 112385 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 ||||| | | ||| ||| |||| | ||| || | |||||||||| || Sbjct 112384 AAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCGTGGAG 112325 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| ||||| || | |||||| |||||||| Sbjct 112324 ATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCA 112292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434001781800