Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq67 255 7e-63 seq114 150 2e-31 >seq67 Length=1756221 Score = 255 bits (282), Expect = 7e-63 Identities = 1124/1751 (64%), Gaps = 55/1751 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 1592159 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1592100 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 104336 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 1592099 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 1592044 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 |||||||||| || || || |||||| |||| ||||||| | | | | |||| Sbjct 1592043 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 1591984 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 1591983 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1591924 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 104515 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 1591923 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 1591866 Query 104516 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 1591865 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1591806 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | || | ||| ||| || || | || |||| || ||||| || Sbjct 1591805 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1591746 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 1591745 GCACTCCGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1591686 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || || ||| || || ||||| || ||||| ||||||||| | |||||| | Sbjct 1591685 TGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAA 1591626 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | || || | || ||||| ||| |||| | || Sbjct 1591625 GAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGG 1591566 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869 |||||||| || || || ||| |||||||||| ||| || | | | | || |||| Sbjct 1591565 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-AAGGCGGGCAAGGGTC-GCAAGACG 1591508 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 1591507 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 1591449 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| ||||| || ||||| |||| |||||||| |||||||| | ||| || Sbjct 1591448 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCAT 1591389 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || |||||||| || || ||||| | || | | | || ||| || || Sbjct 1591388 CCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGT 1591329 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108 || ||||| || || | |||| ||| | | || || | || ||| Sbjct 1591328 CTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTTGC 1591274 Query 105109 TTA----TGAAAAA-CTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | | || || || ||| | || | | ||| | ||||| |||| | Sbjct 1591273 TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATC 1591214 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || ||| || ||||| || || ||||| || ||| ||| | ||||| || Sbjct 1591213 ATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCC 1591154 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282 |||||||| |||||||||||||| || |||| ||| || || || ||| | || || Sbjct 1591153 ATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGA 1591095 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| ||| || || ||||| || || ||||||||||| |||||||| || || Sbjct 1591094 GTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATCTTTGAGACCATTTATCACGCTGCGCT 1591035 Query 105343 TGAGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || ||| |||| ||| || ||||| || ||||| ||||||| Sbjct 1591034 CACTGCCTCCGTGCAGC--TGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 1590977 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 105460 || || || | || | || || || || |||||| | | || || | || Sbjct 1590976 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 1590917 Query 105461 GACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| ||||| | || | | | ||||| | || | ||||||||||| ||| Sbjct 1590916 GACTGGGAGGCTCTTCGAG--AGGAAGTCAAGACACACGGCATCCGTAACAGTCTACTCC 1590859 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 1590858 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 1590799 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||||| | || ||||| | | | ||||| || ||||| | ||||||| Sbjct 1590798 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAA-- 1590741 Query 105639 AGCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 105694 | || || | | ||||| || || ||||| |||||| | | ||||||| | Sbjct 1590740 --CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 1590683 Query 105695 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAG 105754 | ||| | | | |||||||||||| || ||| | || || || | ||| Sbjct 1590682 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 1590623 Query 105755 AAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGAT 105814 |||| || |||||||| ||| | | ||| | | ||||| || ||| Sbjct 1590622 GCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGAT 1590563 Query 105815 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGA 105872 || ||| ||||||||||| |||| ||| |||| || |||| | || |||| Sbjct 1590562 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 1590505 Query 105873 TGTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATG 105931 || |||| || | ||||||| | | || | |||||| || ||||| || || ||| Sbjct 1590504 TGGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATG 1590446 Query 105932 TATTACCTCCG 105942 || ||||| || Sbjct 1590445 TACTACCTTCG 1590435 >seq114 Length=1428553 Score = 150 bits (166), Expect = 2e-31 Identities = 208/286 (73%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 94730 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 112526 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 112584 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 112585 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 112644 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | ||||||||| | || ||| | || || || ||||||||||||||||||| || Sbjct 112645 CTC-TTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTG 112703 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || ||||| | |||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 112704 GTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 112763 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 112764 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 112809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259669932200