Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq91 116 3e-21 >seq91 Length=1575054 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || || ||||||||| | || || || || || || | | Sbjct 521672 CCATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTT 521731 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || || | ||||| || ||||| ||||| || ||||| || ||||| | Sbjct 521732 CCGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACC 521791 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | || || || || | ||||||||| || | || ||| | || | || ||||||| Sbjct 521792 AGCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACA 521851 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||| |||||||| || | ||| | ||| | || | || ||||| || Sbjct 521852 ACATTCAGAAGGAGTCTACTCTTCATCTTGTTCTCCGCCTCCGTGGTGGTAT 521903 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || ||| | |||||||| ||||| || | ||| Sbjct 522184 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 522243 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || ||||| || || || || || |||||| Sbjct 522244 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 522303 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| ||| | || || | || ||||||| |||||| Sbjct 522304 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 522363 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || | || |||| | ||| | || ||||| || Sbjct 522364 ATTCAGAAGGAATCTACTCTTCACCTGGTGCTCCGTCTTCGTGGTGGTAT 522413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917557345600