Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq96 138 3e-27
seq98 136 9e-27
seq91 114 3e-20
seq97 111 4e-19
seq67 89.7 1e-12
seq64 87.8 4e-12
>seq96
Length=874474
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||||| ||||| || || ||||| |||||||||||
Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
||||| |||||||| || ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 746704
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| |||| || || || | ||||| ||||||||||||| || || | |||
Sbjct 746705 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 746763
>seq98
Length=1093051
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||||| || || |||| ||||| ||| || || | |||||
Sbjct 289130 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 289071
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| ||||| || ||||| || || || || ||||||||
Sbjct 289070 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 289011
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || | ||||| || | |||||||||
Sbjct 289010 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 288951
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || | || || | ||| | ||||| ||
Sbjct 288950 TTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTT 288916
>seq91
Length=1575054
Score = 114 bits (126), Expect = 3e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| || || ||||||||||| || || || |||| || || ||| || ||
Sbjct 522632 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTG 522573
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | |||||| |||||||||||||| || || || || || ||||| ||
Sbjct 522572 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCC 522513
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||| || || ||||| |||||| ||||| ||||| | || || || |
Sbjct 522512 TCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGG 522453
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || | ||| || | ||| | |||||
Sbjct 522452 GTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412
>seq97
Length=2068
Score = 111 bits (122), Expect = 4e-19
Identities = 198/282 (70%), Gaps = 9/282 (3%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGAT 7499
|| || ||||||||||| | | || ||||| ||||| |||||| ||||| || |
Sbjct 426 ACATTGTATTTAATATTCGCTCTTTTCTCTGG-ATTATTAGGTACAGCCTTTTCAGTGTT 484
Query 7500 TATAAGGTTAGAA-TTAGCTGCTCCGG-GTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557
|| || | ||| ||||| | | || |||| ||||| | | ||||| ||| |
Sbjct 485 AATTAGACTTGAACTTAGCGGGCCAGGAGTTC---AATAT--ATTTCTAATAATCAATTA 539
Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617
|| ||| | | ||||| || || || | | ||||| ||||| | |||||||| |
Sbjct 540 TATAACAGTGTAATTACAGCTCACGCTATATTAATGATATTCTTCATGGTTATGCCTGCA 599
Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677
| ||||| || || ||||||| || | ||||||||| | |||| ||| ||||||||
Sbjct 600 TTAATAGGTGGGTTTGGAAATTTTTTAATGCCTTTAATGGTAGGTGGTCCGGATATGGCA 659
Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || || | || ||||||||||| |||||| |||| |||
Sbjct 660 TTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCCCCT 701
>seq67
Length=1756221
Score = 89.7 bits (98), Expect = 1e-12
Identities = 183/272 (67%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559
|| ||||| |||| || | ||| || ||||||| ||||| || | || |||
Sbjct 1591404 TTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCA 1591463
Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619
| || || | |||||| | |||||| | ||||| || | ||| | | ||||
Sbjct 1591464 GTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTG 1591523
Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679
|| || ||||||||||||||||||| |||| || || | ||||||| ||| ||||
Sbjct 1591524 CCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGG 1591583
Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739
|| || || || ||||| | || |||| || || | | || || | |||||||
Sbjct 1591584 CCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATG 1591643
Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
|| || |||| |||||| ||| ||||||
Sbjct 1591644 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAG 1591675
>seq64
Length=126418
Score = 87.8 bits (96), Expect = 4e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 4480 CCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGTGTT 4539
|||||||||||||| |||||||| ||||| || |||||||| || || || |||| |||
Sbjct 84365 CCATCAGTAATAGAAATAACATTAGTAGGAATGTAAGCAGACACGTCTCCACCTTGGGTT 84306
Query 4540 TCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575
|| | || ||| ||||| || | | | |||||||||
Sbjct 84305 TCAATAATAGGAAAGGCAGTCATTAAGCCACCACCA 84270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528831707570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |