Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq96 138 3e-27 seq98 136 9e-27 seq91 114 3e-20 seq97 111 4e-19 seq67 89.7 1e-12 seq64 87.8 4e-12 >seq96 Length=874474 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | ||||| ||||| || || ||||| ||||||||||| Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 ||||| |||||||| || ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 746704 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| |||| || || || | ||||| ||||||||||||| || || | ||| Sbjct 746705 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 746763 >seq98 Length=1093051 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || |||| ||||| ||| || || | ||||| Sbjct 289130 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 289071 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| ||||| || ||||| || || || || |||||||| Sbjct 289070 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 289011 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||||||| Sbjct 289010 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 288951 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || | || || | ||| | ||||| || Sbjct 288950 TTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTT 288916 >seq91 Length=1575054 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || || ||||||||||| || || || |||| || || ||| || || Sbjct 522632 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTG 522573 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| | |||||| |||||||||||||| || || || || || ||||| || Sbjct 522572 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCC 522513 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| || || ||||| |||||| ||||| ||||| | || || || | Sbjct 522512 TCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGG 522453 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| || | ||| | ||||| Sbjct 522452 GTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412 >seq97 Length=2068 Score = 111 bits (122), Expect = 4e-19 Identities = 198/282 (70%), Gaps = 9/282 (3%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGAT 7499 || || ||||||||||| | | || ||||| ||||| |||||| ||||| || | Sbjct 426 ACATTGTATTTAATATTCGCTCTTTTCTCTGG-ATTATTAGGTACAGCCTTTTCAGTGTT 484 Query 7500 TATAAGGTTAGAA-TTAGCTGCTCCGG-GTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557 || || | ||| ||||| | | || |||| ||||| | | ||||| ||| | Sbjct 485 AATTAGACTTGAACTTAGCGGGCCAGGAGTTC---AATAT--ATTTCTAATAATCAATTA 539 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || ||| | | ||||| || || || | | ||||| ||||| | |||||||| | Sbjct 540 TATAACAGTGTAATTACAGCTCACGCTATATTAATGATATTCTTCATGGTTATGCCTGCA 599 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| || || ||||||| || | ||||||||| | |||| ||| |||||||| Sbjct 600 TTAATAGGTGGGTTTGGAAATTTTTTAATGCCTTTAATGGTAGGTGGTCCGGATATGGCA 659 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 || || || | || ||||||||||| |||||| |||| ||| Sbjct 660 TTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCCCCT 701 >seq67 Length=1756221 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/272 (67%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 || ||||| |||| || | ||| || ||||||| ||||| || | || ||| Sbjct 1591404 TTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCA 1591463 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | || || | |||||| | |||||| | ||||| || | ||| | | |||| Sbjct 1591464 GTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTG 1591523 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 || || ||||||||||||||||||| |||| || || | ||||||| ||| |||| Sbjct 1591524 CCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGG 1591583 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 || || || || ||||| | || |||| || || | | || || | ||||||| Sbjct 1591584 CCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATG 1591643 Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 || || |||| |||||| ||| |||||| Sbjct 1591644 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAG 1591675 >seq64 Length=126418 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 4480 CCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGTGTT 4539 |||||||||||||| |||||||| ||||| || |||||||| || || || |||| ||| Sbjct 84365 CCATCAGTAATAGAAATAACATTAGTAGGAATGTAAGCAGACACGTCTCCACCTTGGGTT 84306 Query 4540 TCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 || | || ||| ||||| || | | | ||||||||| Sbjct 84305 TCAATAATAGGAAAGGCAGTCATTAAGCCACCACCA 84270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528831707570