Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq91 123 6e-23
seq98 104 5e-17
seq96 93.3 1e-13
>seq91
Length=1575054
Score = 123 bits (136), Expect = 6e-23
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||||||||||||||| || || ||||||||||| | | ||| |
Sbjct 521892 GAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCG 521833
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|| || || || || |||||||| || |||| | |||||||| | | ||| || |
Sbjct 521832 GCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGT-TGCTGGTCGGGGGGGATGCCCT 521774
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || ||||| || |||||| | || | |||| ||| ||| || || || |
Sbjct 521773 CCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGG 521714
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || || ||||| ||||||| ||||||
Sbjct 521713 TGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 521674
Score = 114 bits (126), Expect = 3e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| |||||||| ||||| || || ||||||||||| ||||| | ||||
Sbjct 522174 GAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCG 522115
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| || || || || || | ||||||||| | | ||| ||
Sbjct 522114 ACCGTCTTCCAGTTGCTTT--CCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCC 522057
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||| | || | | | || || ||| || ||||||
Sbjct 522056 TCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCAAGA 521997
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || || ||||| ||||| ||||| ||||
Sbjct 521996 GTGATGGTCTTGCCAGTGAGGGTCTTGACGA 521966
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || ||||||||||| || || || |||||||| |||| | ||||| |||||
Sbjct 522396 GAGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATC 522337
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||| || |||| | || || ||||| ||
Sbjct 522336 CTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTC 522277
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| | || | | | || || ||| ||||| |||||||| ||
Sbjct 522276 CTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGT 522217
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| ||||||| |||||
Sbjct 522216 CTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| || || || ||||| ||||| || |||||||| || ||| | || |
Sbjct 522629 AGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGA 522570
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| | || || ||||||||||| | |||||| || | | || || |||
Sbjct 522569 CCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCC 522510
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || ||||| || || || | || | |||| | ||| || ||||| ||
Sbjct 522509 TTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTG 522450
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||||||||||||||| | ||||||
Sbjct 522449 ATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412
>seq98
Length=1093051
Score = 104 bits (114), Expect = 5e-17
Identities = 158/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || ||||||||||| ||| | || |
Sbjct 289137 GAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 289078
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | ||||||||| | | ||| || ||
Sbjct 289077 GCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTC 289018
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 289017 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 288958
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || || || ||||| ||||| ||||| | |||||| || ||
Sbjct 288957 GATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 288913
>seq96
Length=874474
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||||| ||||| || || || || ||||||||
Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||| ||||||| | || || ||||| || || || || |||||| | ||
Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 746704
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || || || || |||||||| || |||||||||||
Sbjct 746705 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 746763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818508584005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |