Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq98 168 1e-36
seq91 159 7e-34
seq96 152 1e-31
seq114 123 5e-23
seq46 87.8 4e-12
>seq98
Length=1093051
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || ||||| || | ||| || || ||||||||||||||
Sbjct 289146 ACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 289087
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || |||||||| | || || |||||| ||
Sbjct 289086 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGG 289027
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 289026 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 288967
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||||||||| || || | ||||| ||||| |||||||| ||
Sbjct 288966 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTT 288916
>seq91
Length=1575054
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || ||||| | || || || || |||||||| ||||
Sbjct 521901 ACCACCACGGAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGA 521842
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| || ||||| ||||| ||||| ||
Sbjct 521841 GAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGG 521782
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || || | ||||||||||| |||| || ||
Sbjct 521781 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAAC 521722
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 521721 CTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 521674
Score = 158 bits (174), Expect = 3e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || ||||| || | || ||| || || ||||||||||| |
Sbjct 522411 ACCACCACGAAGACGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGA 522352
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| ||||| || || |||||||| | || ||||| || ||
Sbjct 522351 AAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGG 522292
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||||||| |||||| ||||| || || |||| || || || || | ||||
Sbjct 522291 AATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTATCAATGGTATCGGATGACTCGA 522233
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| ||||| || ||||| || || | ||||| ||||| || |||||
Sbjct 522232 CTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || ||||| | || ||| || |||||||||||||| ||
Sbjct 522183 ACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGC 522124
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || || || ||||| || || ||||| |||| || || |||||| ||
Sbjct 522123 AAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGG 522064
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| || || || | |||||
Sbjct 522063 GATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGAC 522004
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093
|| |||||||| ||||| || || | ||||| |||| |||
Sbjct 522003 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 521962
Score = 116 bits (128), Expect = 8e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | || || || |||||||| |||||
Sbjct 522638 CCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTC 522579
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || | || || || || ||||| | ||| || || ||| |||
Sbjct 522578 AGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGA 522519
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || || ||||| ||| || ||| | ||||||||||| || || ||
Sbjct 522518 ATGCCCTCCTTATCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGTCACTAGACTCAAC 522460
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 522459 CTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412
>seq96
Length=874474
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || || ||||||||||| ||||| || || || ||||||
Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || |||||||| ||||| ||||||||||| |||||||| | || || | |||
Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 746704
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| |||||
Sbjct 746705 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 746763
>seq114
Length=1428553
Score = 123 bits (136), Expect = 5e-23
Identities = 176/248 (71%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| || | || | | |||| |||||||| | || ||| |||| ||
Sbjct 112865 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 112924
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
||| |||||||||| |||| |||||| ||| || || || ||||| ||||||||| |
Sbjct 112925 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 112984
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
| || || || || ||||||| || || || ||| |||||||||| || |||||
Sbjct 112985 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 113044
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || || || || || ||||||||||| |||||||| ||| || |||| |
Sbjct 113045 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAAAAG 113104
Query 230403 CCCGGTGT 230410
|||||||
Sbjct 113105 GCCGGTGT 113112
>seq46
Length=599880
Score = 87.8 bits (96), Expect = 4e-12
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 315640 AATTCGCCACTGTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCC 315699
|| ||| || |||| |||| | | || ||||| |||| ||||| || |||| | |
Sbjct 201849 AACTCGGCAGAGTGAGTAATGATGATGACACCACCCTCGAACTTCTTCAGGGCCTTGGAC 201908
Query 315700 ATGGCACCGAGACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGG 315759
| |||||||||| || || || | ||||||| ||||| ||||| ||||| | ||
Sbjct 201909 AGGGCACCGAGAGAGTCACGATCGAGGTAGTTGGTAGGCTCGTCAAGGACGATAAGATGA 201968
Query 315760 GGTTGTTGCCATAGAGCG-GCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCC 315818
||| | ||||| ||||| ||| | | || ||| | || ||||||||||| ||
Sbjct 201969 GGTCGCTGCCA-AGAGCAAGCGGCAAGGACAGTCTTGACACGCTGACCACCAGACAGACC 202027
Query 315819 ACGGATGCGAGAATGAG 315835
||| |||||||| ||||
Sbjct 202028 ACGCATGCGAGAGTGAG 202044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737121241370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |