Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq98 140 3e-28 seq91 140 3e-28 seq96 123 2e-23 >seq98 Length=1093051 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| ||||||||| ||||| |||||| Sbjct 289145 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 289086 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| || || || || ||||| ||||| | ||| Sbjct 289085 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 289026 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||| |||||||| Sbjct 289025 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCAC 288967 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || ||||| || || || || ||||| |||||||||||||| || Sbjct 288966 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTT 288916 >seq91 Length=1575054 Score = 140 bits (154), Expect = 3e-28 Identities = 185/251 (74%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||||||| || || ||| Sbjct 521900 CCACCACGGAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAG 521841 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||||||||| |||| ||| || ||||| | ||| Sbjct 521840 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 521781 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | || | ||||||| ||||| Sbjct 521780 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATAGTGTCGGAAGACTCA 521724 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATG 41872 ||||| | || || || || || || || ||||| ||||| ||||||||| | || | Sbjct 521723 ACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATGGTGGCGGT- 521665 Query 41873 GATCTCGCGCG 41883 ||||| |||| Sbjct 521664 GATCTGTCGCG 521654 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || || || ||||||||| |||||||||||| Sbjct 522639 GCCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCT 522580 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || | |||||| || ||||| || || ||||| || || | ||| Sbjct 522579 CAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGG 522520 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||| ||| || || |||| ||| | | | |||||| || ||||| | Sbjct 522519 AATGCCCTCCTTATCCTGAATCTTGCTCTTC-ACGTTGTCGATAGTGTCACTAGACTCAA 522461 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 522460 CCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || |||||||||||||| |||||||| Sbjct 522410 CCACCACGAAGACGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 522351 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || |||||||| || || || || |||||||| |||| |||| Sbjct 522350 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGA 522291 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||||| | | | | || ||| ||||| || Sbjct 522290 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCA-ATGGTATCGGATGACTCGAC 522232 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || ||||| ||||| || ||||| Sbjct 522231 TTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || |||||||| ||||| ||||||| Sbjct 522182 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCA 522123 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || || ||||| || || || ||||||||||| ||||| | || Sbjct 522122 AGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 522063 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | || ||| |||||| || Sbjct 522062 ATACCCTCCTTGTCCTGGATCTTCGACTT-AACATTGTCGATGGTATCGGACGACTCGAC 522004 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 522003 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 521966 >seq96 Length=874474 Score = 123 bits (136), Expect = 2e-23 Identities = 139/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || | || ||||| ||||| || ||||| | Sbjct 746583 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 746642 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||| ||||||||||||| ||||| || |||||||||| ||| || ||| || | Sbjct 746643 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 746702 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || || || || |||||||| ||||| || Sbjct 746703 CG--ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 746760 Query 41851 GAAA 41854 |||| Sbjct 746761 GAAA 746764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303104286000