Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 >seq3 Length=7873615 Score = 120 bits (132), Expect = 3e-22 Identities = 199/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || ||||| || || | ||| |||| ||||| |||||||| || ||||| Sbjct 2197262 ATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGG 2197321 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||||||||||||||| | || || || || || ||||| || | ||| Sbjct 2197322 AAACCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCAACAAGG 2197381 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 |||||||| ||||| ||||| ||||| || || || | ||||| ||||| ||| Sbjct 2197382 TTCTCATTGACGATGCCGTCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGATGAAGTAT 2197441 Query 16652 TTTTCGTCAGATGT---AAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 | ||||| || || | | | | ||| || | | ||| ||||| | ||| | || Sbjct 2197442 TGCTCGTCCGAAGTCAAACGGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCC 2197501 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| ||| ||| ||||||| || ||||||| ||| || Sbjct 2197502 TCAGCTGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAGAT 2197548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414233790320