Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=11834931 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 3545843 AGCTGGACCTTGAGGGCGTCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 3545902 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 ||| | || || | || | || ||| || | ||||| |||| || | |||| Sbjct 3545903 GTGAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAACAACGCGTAG 3545962 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| ||||| || | || || ||||||| ||| ||| Sbjct 3545963 CTAGCAATGTTGAAGGGGACACCCAGACCCATATCGCAAGATCGTTGGTACAACTGACAG 3546022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076608225040