Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 5e-11 >seq3 Length=7873615 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | || ||||| || ||||| || || | || || | ||||| |||| Sbjct 2197143 CGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATC 2197084 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || || |||||||||||| | ||| Sbjct 2197083 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATTTCT 2197024 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGT 22893 ||||| || ||||| ||| ||||||||| ||| Sbjct 2197023 CGTGATGAGGGTCTTCACACTGACTTTGCCTGT 2196991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233487118478