Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3 399 6e-106
>seq3
Length=7873615
Score = 399 bits (442), Expect = 6e-106
Identities = 1149/1744 (66%), Gaps = 40/1744 (2%)
Strand=Plus/Plus
Query 363436 GGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGC 363495
||| | |||| ||| ||||||||||||||| | ||||| || ||| |||| ||| |
Sbjct 1402612 GGTAAAATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGGATCTGGGGT 1402671
Query 363496 CCGGATGTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGC 363553
||| |||| | | || ||||| || || | | | || || | ||||| |
Sbjct 1402672 GACGATATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTC 1402729
Query 363554 ACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTC 363613
| || | || || ||| ||| || || || | | || ||| | || || ||||| |
Sbjct 1402730 ATGCGAGCCCCACTTTGTTCAACGCCGGTACCCCACAGCCTCAGCTCTCATCATGCTTCC 1402789
Query 363614 TTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTC 363673
|| | | |||||||| || ||| || ||||||| || || || |||| ||||||
Sbjct 1402790 TTGTTGATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCA 1402849
Query 363674 TTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAAC 363732
| |||||||||| || || || ||||| || |||| | ||||| || | |
Sbjct 1402850 TGATTTCCAAGATGGCTGGTGGTATTGGCTTAAACGCCCACCGAATCCGTGCCACTGG-C 1402908
Query 363733 AGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTT 363791
|||||| ||| || || |||| | || || | ||||||||||| ||||||||
Sbjct 1402909 TCTTACATCGCCGGTACCAATGG-TACTTCCAACGGTATTGTTCCCATGCTGCGTGTGTT 1402967
Query 363792 TGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTAT 363851
|||| ||||| | ||||||||||||||||| ||||| || || || || ||
Sbjct 1402968 CAACAACACTGCTCGTTACGTCGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCAT 1403027
Query 363852 GTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGG 363911
|| || ||||| || ||||| | || ||||| ||||| ||||| || ||| ||
Sbjct 1403028 CTACCTTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGG 1403087
Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971
||| ||||| | || || ||||| |||||| || |||||| | |||| | ||| ||
Sbjct 1403088 AAAGGAGGAGGTCCGCGCTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTCAT 1403147
Query 363972 GAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGT 364029
|||||| || ||| ||| | | | ||| | ||| | ||||| ||||||| || |||
Sbjct 1403148 GAAGCGTGTCGAG--AGGAACGGCGAATGGACTCTCATGTGCCCCAACGAATGCCCTGGT 1403205
Query 364030 CTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089
||| | || | |||||||| | || ||||| ||||||||||| || |||||
Sbjct 1403206 CTTGCTGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGT 1403265
Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149
|||| ||| ||| | || || |||||||| |||| ||||| | || | ||||
Sbjct 1403266 AAGGGTCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACA 1403325
Query 364150 GAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208
||||| |||| ||||| | ||| | ||||| ||| ||||| |||||| |||||| |
Sbjct 1403326 GAGACTGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAA 1403384
Query 364209 GCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTC 364267
| |||||||||| | || | || |||||| || || ||||| ||||||||| ||| |
Sbjct 1403385 GAACCTTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCC 1403443
Query 364268 CCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------ 364321
| || ||| || || || |||||||| || | | || || | || | |
Sbjct 1403444 CTGATGAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATG 1403503
Query 364322 AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381
|||||| | | ||| | || | || | || || || | || | |||||
Sbjct 1403504 AAGATGCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATT 1403563
Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAA 364436
| ||||| | |||||| || | || || | | || || || ||| ||
Sbjct 1403564 TGAACAAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AA 1403618
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
|||||||| || || |||||||||||||| || || |||||||| | || | ||
Sbjct 1403619 CATGCGTCACCGACCCATTGGTCTTGGTGTTCAAGGTCTCGCTGATGCCTTCCTTGCCCT 1403678
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| ||| | ||||| || || || ||||||| || || ||| | ||||| || || ||
Sbjct 1403679 CCGCATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCAT 1403738
Query 364557 GTATTTTGCCGCAATGACTGCTTC-GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615
|| ||| || | || | || ||| | | | ||| | || || ||||| |
Sbjct 1403739 CTACCATGCTGCCCTTACCACGTCTGTGCAACTCGCCAAGGAGGAA-GGTCCCTACTCCA 1403797
Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675
| | |||| |||||| || |||| | |||||||||| | |||||||||| ||
Sbjct 1403798 CCTTCAAGGGTTCCCCTGCCTCTGAGGGTATTCTCCAGTTTGACATGTGGAATGTCAAGC 1403857
Query 364676 CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCA 364735
| |||| | ||| | ||||| | || || | || |||| || |||| ||||
Sbjct 1403858 CCTCTGATCTTTGGGATTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCA 1403917
Query 364736 AC--TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792
|| || |||||| || || ||||| || || ||| | ||||| || || ||||
Sbjct 1403918 ACAGTCTGCTCGTT---GCTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACA 1403974
Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852
|||||||||| || || | || ||| | || |||||| || ||| | || || |
Sbjct 1403975 ACGAGTGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGT 1404034
Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912
| | ||| || || | || ||||||||||| |||| || || ||| ||
Sbjct 1404035 TCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATG 1404094
Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972
||||||||| ||||| || | ||| |||||| | |||||||| || | || |
Sbjct 1404095 CTATGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTG 1404154
Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032
|| | ||| || | ||||| || || ||||| ||||| |||| | | | |
Sbjct 1404155 CCGAGATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGA 1404214
Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092
|||| || || || ||||| || || |||| ||||| | ||| | |||||
Sbjct 1404215 TGGCTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGG 1404274
Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152
| || ||| | |||| | || |||||| ||| || ||||| |||||| ||||
Sbjct 1404275 ACCCTACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGA 1404334
Query 365153 CAGG 365156
| ||
Sbjct 1404335 CTGG 1404338
Score = 102 bits (112), Expect = 2e-16
Identities = 151/211 (72%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACG-TTCATTCGCGGAACG 22493
|| ||||| |||||||| | |||||| | |||| |||| ||| || || | ||
Sbjct 2197200 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAA-GAACTCTTCCTTTGCTCAGCG 2197142
Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553
|||| |||| ||||||| ||||| || || ||||| || || ||| | | |||||
Sbjct 2197141 TCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTT 2197082
Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613
||||| || || |||| | ||||| ||||| | ||||| || ||| | ||| ||
Sbjct 2197081 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATTTCTCG 2197022
Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|||||||||||||| || || ||||| |||
Sbjct 2197021 TGATGAGGGTCTTCACACTGACTTTGCCTGT 2196991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353165820332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |