Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 4e-13
seq2 82.4 6e-11
>seq3
Length=7873615
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || |||||||||||| || ||| | | |||
Sbjct 6200839 AGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 6200898
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | ||||| ||||| |||||| || | ||||| |||||
Sbjct 6200899 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 6200958
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | ||| || | | | | |||||| | |||| || | |||||| ||
Sbjct 6200959 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 6201018
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||| |||||||||||
Sbjct 6201019 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 6201050
>seq2
Length=8944178
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || || ||||| || ||||||||||||| | |||| | |||||
Sbjct 2591349 AGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 2591408
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| || |||| | ||||| ||||| ||| | ||||| |||||
Sbjct 2591409 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 2591468
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | ||| || | | | | ||||||| | ||| || | |||||||||
Sbjct 2591469 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCAAGGGTGATGGTC 2591528
Query 16904 TTTCCGGTCAGCGTTTTGAC 16923
|| ||||||| || |||||
Sbjct 2591529 TTGCCGGTCAAGGTCTTGAC 2591548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087871637740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |