Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=8944178
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| || || || || ||||||||||| |||| || ||| || ||||
Sbjct 2591631 AGGACGAGATGAAGGGTTGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGGCCGTCC 2591690
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| |||| | ||||||||||| ||||| || || || || ||
Sbjct 2591691 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 2591750
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || || | || | ||||
Sbjct 2591751 TGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGTC 2591810
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || ||||| ||||||||
Sbjct 2591811 TTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 2591842
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| || || || || ||||| |||| || ||| || | ||
Sbjct 2591859 AGGACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGAGAGGGTACGGCCATCC 2591918
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| |||| | |||||||| || || || || || || || ||
Sbjct 2591919 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCCGGGGGGATACCCTCCTTGTCC 2591978
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | |||||| | || || || | || | |||
Sbjct 2591979 TGAATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTC 2592038
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||||| || || ||||| || |||||
Sbjct 2592039 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 2592070
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || ||||| || || |||||||| || | || ||| || ||||
Sbjct 2591348 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTC 2591407
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| |||||||||||||| |||| | ||||||||||| ||||| || || || || ||
Sbjct 2591408 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 2591467
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | || || | || || || | || | |||
Sbjct 2591468 CTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCAAGGGTGATGGT 2591527
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
|||||||||||| || || ||||
Sbjct 2591528 CTTGCCGGTCAAGGTCTTGACGA 2591550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644637615440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |