Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-19 >seq1 Length=11834931 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | ||||| || |||||||| || ||||||||| | ||||||||| Sbjct 3032954 GGTAAGGAAGGTCGTCTCAGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 3033013 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || | ||| | || || ||||| |||| | ||| Sbjct 3033014 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCACGAGGTCGGTGTGCCTCGAAGTATC 3033073 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || | || ||||||| | ||| | |||||| Sbjct 3033074 GCCAGAACCCTTACTTATCCCGAGACTGTAAC 3033105 Score = 86.0 bits (94), Expect = 5e-11 Identities = 193/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| ||||| ||||||||||| ||||| | ||| | || | |||| | || Sbjct 2756460 ACGAGACGGTTATCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACC 2756519 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 2756520 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCG 2756579 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || || ||||| || || | || ||| Sbjct 2756580 AAGATGAGGACGTTGCGCTCACCCTCGACCTTCTTGTCGAGACCGTAGGCGATGGCGGCA 2756639 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || || || || || |||| | ||| || ||||| || || || ||||| || Sbjct 2756640 GCGGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTG 2756699 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || | || || ||||| || || ||||| || || | |||||| Sbjct 2756700 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGC 2756749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821109794356