Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 3e-19
>seq1
Length=11834931
Score = 113 bits (124), Expect = 3e-19
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| ||||||||| | ||||| || |||||||| || ||||||||| | |||||||||
Sbjct 3032954 GGTAAGGAAGGTCGTCTCAGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 3033013
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || |||||| |||| |||| || | ||| | || || ||||| |||| | |||
Sbjct 3033014 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCACGAGGTCGGTGTGCCTCGAAGTATC 3033073
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|| | || ||||||| | ||| | ||||||
Sbjct 3033074 GCCAGAACCCTTACTTATCCCGAGACTGTAAC 3033105
Score = 86.0 bits (94), Expect = 5e-11
Identities = 193/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|| ||||| ||||| ||||||||||| ||||| | ||| | || | |||| | ||
Sbjct 2756460 ACGAGACGGTTATCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACC 2756519
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| ||| | || || |||| | | |||| ||||| ||| |||||||| | |||
Sbjct 2756520 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCG 2756579
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
|| || || || || || || || || || ||||| || || | || |||
Sbjct 2756580 AAGATGAGGACGTTGCGCTCACCCTCGACCTTCTTGTCGAGACCGTAGGCGATGGCGGCA 2756639
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
|| || || || || || |||| | ||| || ||||| || || || ||||| ||
Sbjct 2756640 GCGGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTG 2756699
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
|| || || | || || ||||| || || ||||| || || | ||||||
Sbjct 2756700 GTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGC 2756749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780821109794356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |