Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 7e-44
>seq3
Length=7873615
Score = 192 bits (212), Expect = 7e-44
Identities = 1096/1736 (63%), Gaps = 45/1736 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || |||||||| || | ||||| | | ||||| | |
Sbjct 1404353 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 1404294
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| || || | | ||| ||| |||||||||
Sbjct 1404293 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 1404234
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | | || ||| || || |||||||| ||
Sbjct 1404233 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 1404177
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823
||| ||| |||||| || | ||||| | | ||| || || || ||||| |
Sbjct 1404176 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 1404117
Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883
|| ||| || | | ||||||| | | |||||||||||| || | ||||| |||
Sbjct 1404116 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 1404060
Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943
| || |||||||| | ||||| || || ||| || | | ||||||||
Sbjct 1404059 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 1404000
Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003
| ||||| || |||||||| || || || || | || || | ||| ||| || |||
Sbjct 1403999 GAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGC 1403940
Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063
|| || || | | |||||||| || | ||| | ||||| || |||
Sbjct 1403939 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 1403880
Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121
||||| || | | | || || || || |||| |||| ||||| || || | || |
Sbjct 1403879 TCCCAATCCCAAAGATCAGAG-GGCTTGACATTCC-ACATGTCAAACTGGAGAATACCCT 1403822
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180
|| | || ||||||| || || |||| ||||| | | || | || |||||
Sbjct 1403821 CAGAGGCAGGGGAACCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAG 1403762
Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240
|| |||| || || || ||||| || ||||| | |||| ||| ||
Sbjct 1403761 A-CGTGGTAAGGGCAGCATGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 1403703
Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300
|| || ||||| | |||| || || |||| |||||||||||||||||
Sbjct 1403702 TCGGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCGAGACCTTGAACACCA 1403643
Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360
| |||||| |||| ||| ||||| || || || || | || || || ||
Sbjct 1403642 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 1403583
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
||| |||| ||| | ||| | ||||| | |||| || || || || |
Sbjct 1403582 ACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTG 1403523
Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
| || | || || ||||||| ||| | || || | | || || |
Sbjct 1403522 AAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAGAGACAAGGAGGCAAGG 1403466
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||||||||| |||||| | ||| || | || || || |||| ||||||
Sbjct 1403465 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 1403406
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||||||||| ||||| ||||| |||||||||||||
Sbjct 1403405 CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATCCTTGTAGAGC 1403346
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656
||| | || | || ||||| ||||| | || ||||| || | ||| | | || | | |
Sbjct 1403345 ATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCC 1403286
Query 106657 -TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
|| || | | || | ||| | ||||| |||||||||| ||| || || |||||
Sbjct 1403285 TTGATAGACTTGC---GACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 1403229
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773
|| ||||| ||| | ||||| || || || || || || | |||| |||||
Sbjct 1403228 TCGTCACCGTAGCAGTCAGCAAGACCAGG-GCATTCGTTGGGGCACATGAGAGTCCATTC 1403170
Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
|| | ||| || |||||||||||||| || || ||||| || | || || ||
Sbjct 1403169 GCCGTTCCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCCAGGAACAGGTC 1403110
Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893
| | || |||| || | || ||||| ||| | ||||||||||| | || ||
Sbjct 1403109 ACGAGCGCGGACCTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTC 1403050
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947
||||||||||||||||| |||| |||| || || ||| | ||| | ||
Sbjct 1403049 GGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 1402993
Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007
| || || || || ||| ||| || || || ||||| |||| |||||| | ||
Sbjct 1402992 GTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACAATACCGTTGGAAGT 1402933
Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067
|||||| || || || ||| | |||| | | ||| || | |||||
Sbjct 1402932 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTTAAGCCAAT 1402873
Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127
||| |||||| ||| || || ||||| | | || || | |||||||| | ||
Sbjct 1402872 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 1402813
Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187
||||||||| | | | ||||||||| || | ||| || ||| ||||| ||
Sbjct 1402812 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAGAGCTGAGGCTGTGGGGTACCGGC 1402753
Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245
||||| | || || | || ||| ||| | | |||| ||||| || |||||||
Sbjct 1402752 GTTGAACAAAGTGGGGCTCGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 1402695
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
||||||||| ||||| || || || ||| || | || || ||||| | |||
Sbjct 1402694 TCCAAGACACGCTCAATATCGTCACCCCAGATCCCAACAGCGACTCGCATGATCAT 1402639
Score = 113 bits (124), Expect = 5e-20
Identities = 334/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 2196707 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2196766
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || | | || | | | | || | | | || ||||
Sbjct 2196767 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCCAC------GAGG 2196820
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|| ||||| | || | || ||||||| ||| | |||||||| |||| |||
Sbjct 2196821 AGGCGATCGGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 2196880
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| ||||| || || || |||| | | |||||| ||| || || | | |||
Sbjct 2196881 GCACAAGGGAGAGCCTCGGTGAGGAACTCCTGCTCAATAGAAACGGCATCGGTGATAATG 2196940
Query 117220 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| ||||| | | | ||| ||| || | || | || ||| || ||||
Sbjct 2196941 TCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCA 2196997
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| ||||||||||| || ||||| || || || || |||| || || |||
Sbjct 2196998 AAGTCAGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTGGAAAAGCTCAGACCAGGC 2197057
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACC 117395
||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||||
Sbjct 2197058 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 2197116
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAA 117452
||| || ||||| |||| ||| |||| || ||||| ||| || |||| |
Sbjct 2197117 CTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGA---AGAGTTCTTGTCCTGGAT 2197173
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTT 117479
|||| || ||||| | |||||||||
Sbjct 2197174 CCATCGGATGGCCCAATCCGCCTTCTT 2197200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980608256240
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