Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=8944178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 263/396 (66%), Gaps = 13/396 (3%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| |||| |||| Sbjct 1121165 GAAAGGTCTGCCTGATCCCTGTTTCTGCCCACGGTACCAACCCTGCCTCGGCTGCTATGG 1121106 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAG 154827 | || ||||| || || ||||||||| || | | || ||||||| | ||||| | | Sbjct 1121105 CTGGTATGAAGGTCGTCACTGTCAAGTGCGACGGCAAGACTGGTAACCTGGACATTGAGG 1121046 Query 154828 ATCTAGAG---AAGAAAGC-AATCATGAATACATTTGAACTGTCATGTATTATGATTACA 154883 |||| || ||| || || || | || || || | ||| ||| | || Sbjct 1121045 ATCTCAAGGCCAAGTGTGCCAAGCACGCTGAC----GAGCTTGCTGCTATCATGGTCACC 1120990 Query 154884 TACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCAT 154943 ||||| ||||| |||||| ||||| | | |||| || | || | | ||||| Sbjct 1120989 TACCCCTCTACCTTTGGTGTCTTTGAGCCCGAGATTAAGCAAGTCTGCGATCTTGTTCAC 1120930 Query 154944 GACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCA 155003 || ||||||||| || || | || || || || | || || ||| | || || Sbjct 1120929 GAGCATGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTTTGC 1120870 Query 155004 AAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTAT 155062 || |||| ||| ||||| ||||| || ||||| ||| | || || || |||||||| Sbjct 1120869 TCTCCCGGTGA-TATCGGTGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTAT 1120811 Query 155063 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 ||| || || ||||| || ||||| || |||||||| Sbjct 1120810 TCCCCACGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 1120775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212611755840