Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3 324 3e-83
>seq3
Length=7873615
Score = 324 bits (358), Expect = 3e-83
Identities = 1154/1767 (65%), Gaps = 104/1767 (6%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||||||||||| || || || ||||||||||| |||||
Sbjct 1404389 ACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTG 1404330
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | | ||
Sbjct 1404329 AGACCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATGGTAG- 1404278
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | || || || | ||| || |||||| ||| || ||||| | |
Sbjct 1404277 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 1404229
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| |||||| ||||| | | | | || ||| || | ||||||||| |||||| | |
Sbjct 1404228 ACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 1404169
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848
| |||| || | |||| | |||||||||||| | ||| || || ||| |||
Sbjct 1404168 AGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACC---GT-TAT---CAG 1404116
Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900
| || | ||| ||| | ||| ||| || ||| || | || |||||
Sbjct 1404115 CAATG-ATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 1404057
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| |||||||| | |||||| || || | || || | | ||||| | ||| ||
Sbjct 1404056 AGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 1403997
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||| ||||| | || ||||||||| || |||||||| | || ||||| || |||||
Sbjct 1403996 GTGTAAGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATA 1403937
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTC 213076
||||| || || |||||||| | | ||||| || | | | | | || ||
Sbjct 1403936 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGG 1403881
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| |||| ||||| |||| | ||| || ||||||||||||||||| |
Sbjct 1403880 TTCCCAATCCCAAAGATCAGAGGG---------CTTGACATTCCACATGTCAAACTGGAG 1403830
Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192
|| || |||| | ||| |||| | | | ||||||||| || | ||||||||
Sbjct 1403829 AATACC----CTCAGAGGCAGGGGAACCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1403774
Query 213193 CCAGCTCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
| || | ||| |||| |||||||| | ||||||||| || || || | | ||||
Sbjct 1403773 CGAGTT-GCACAGACGTGGTAAGGGCAGCATGGTAGATGGTCTCGAAGATTTGCTTGTTC 1403715
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
|||| ||||| || ||| |||||||| | | |||| ||||||| ||
Sbjct 1403714 AGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCGAGA 1403655
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || || | || ||||||| ||| | || ||| || |||| ||| | |
Sbjct 1403654 CCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCTTGGAC 1403596
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||||| |||| ||||||||||||||| | |||||| | |||| ||||| |
Sbjct 1403595 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 1403536
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACA-------AACTCAGGCA 213483
| ||| | || |||| |||||| | || | || | || ||||
Sbjct 1403535 GTGCAGCTTCT------TGAAGTCGTAGCAAGCATCTT-CATAGTTGATGAAAGAGGGCA 1403483
Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543
| | | | ||| ||||||||||| || ||||| | || | | ||| || |||||||
Sbjct 1403482 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 1403423
Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGG 213603
| |||||||||||| || ||||||||| || ||||||| ||| ||| ||||| | |
Sbjct 1403422 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGG-TTGCTCTTGCGATTG 1403364
Query 213604 CAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGG 213662
||| |||||||||||||||| | ||| || |||||| ||||| | | || || |
Sbjct 1403363 CAGTGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCAAGAATGGCG 1403304
Query 213663 CTCCAGAGGTACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACT 213720
||| || | | ||||||| || || ||| | | | | | ||||||||
Sbjct 1403303 TACCAAAGCTTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACT 1403249
Query 213721 GTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCG 213779
|||||| || | | ||||||| || || | | | | || || || || |
Sbjct 1403248 TTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAG-CAAGACCAGGGCATTCGTTG 1403190
Query 213780 GGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838
|| |||||||| |||| || ||| || |||| ||| | || |||||| || || ||||
Sbjct 1403189 GGGCACATGAGAGTCCATTCGCCGTTCCTCTC-GACACGCTTCATGAAAAGATCAGGGAT 1403131
Query 213839 CCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898
||| || || ||||||||| | | | ||| ||| ||| ||| || || ||
Sbjct 1403130 CCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTTCCGTGGTTCTTTCGGAG 1403071
Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958
||| || || || |||| ||| |||||||| ||||| | ||||||||| ||||| || ||
Sbjct 1403070 ATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGG 1403011
Query 213959 CCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGG 214015
| |||| || |||||||| || | || ||||||| | ||||| | |||
Sbjct 1403010 TCGCTTGTTACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 1402951
Query 214016 TACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GG 214073
|| | |||||||| || ||||| || || || || ||||| | ||| | | |
Sbjct 1402950 AACAATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCG 1402891
Query 214074 TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACA 214133
|| | | | || || || ||||| || |||||| |||||||| || | | |
Sbjct 1402890 GTGGGCGTTTA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 1402833
Query 214134 GTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAG 214192
|| || ||| || | |||||||| || | | ||| ||| |||||| |||||
Sbjct 1402832 GTATCGTAGATACCATCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGATGAGAG 1402774
Query 214193 CTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTT 214252
||| ||| | | || | |||||| | |||||||| ||||| | | |||||| |
Sbjct 1402773 CTGAGGCTGTGGGGTACCGGCGTTGAACAAAGTGGGGCTCGCATGAGTGAAGAACTTGCT 1402714
Query 214253 AGAGAGGAGCCTGTAGGTCTCCAGGAC 214279
|| | ||| |||| ||||||| |||
Sbjct 1402713 TGACATGAGGTTGTATGTCTCCAAGAC 1402687
Score = 194 bits (214), Expect = 3e-44
Identities = 488/733 (67%), Gaps = 23/733 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 2196703 CTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 2196762
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||| ||||||| | || |||||| | || ||| | | || |
Sbjct 2196763 CATGAAGTCGAAAGGGTTGGTGGACTTGTACACCT-TCTCGTTGCCGAGAGCCACGAGGA 2196821
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| |||| |||||| | |||||||| | ||||||| || ||||||||| | || |
Sbjct 2196822 GGCGATCGGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGAG 2196881
Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||| | ||||| ||||| ||||||| ||| || ||||| || | |||
Sbjct 2196882 CACAAGGG-AGAGCCTCGGTGAGGAACTCCTGCTCAATAGAAACGGCATCGGTGATAATG 2196940
Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCA 48128
| || || | |||| |||| || ||| || | ||| | | ||| |
Sbjct 2196941 TCCT------GGATCATCTG----TTTGCTG-GCACGTCCCTTGAGGTGAGAGTGGAGGA 2196989
Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188
||||||||||| |||| | || || || || |||||| ||||||| |||| |
Sbjct 2196990 GACAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTGGAAAAGCTCA 2197049
Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248
|||||||||||| || | || ||||||||||| || | || || | || |||||
Sbjct 2197050 GACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGA 2197109
Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308
|||| ||||| || || || || || || | || | || |||| |||||||||
Sbjct 2197110 AGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCT 2197169
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| | ||||| || |||||||| |||||| || || || || | |||
Sbjct 2197170 GGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 2197229
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428
|||||| | | | || | | |||| | |||||| || || | |||
Sbjct 2197230 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATG 2197289
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
| || ||||| | ||||| || ||||||||| || |||||| | ||||| |
Sbjct 2197290 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 2197349
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || | ||||| ||| | || ||||||||||| || || || || ||||
Sbjct 2197350 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCATTGACGATGCCGTCGGAGGCAG 2197409
Query 48549 CAAAGAAGGCAAG 48561
| ||||| |||||
Sbjct 2197410 CGAAGAAAGCAAG 2197422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532497251840
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