Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 6e-13 >seq2 Length=8944178 Score = 89.7 bits (98), Expect = 6e-13 Identities = 263/398 (66%), Gaps = 13/398 (3%) Strand=Plus/Plus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | | Sbjct 1120773 CAATAGGACCGACACCAGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGGAGGT 1120832 Query 138247 TTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTT 138305 | ||||| || ||||| ||||| ||| |||| || ||||| | ||| || || Sbjct 1120833 TAAGATGGCAGACATCAGCACCGATA-TCACCGGGAGAGCAAAGACCAATCTGGGCGTTC 1120891 Query 138306 AGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGT 138365 | || ||||| || | || || ||||||||| || ||||| | | || | || Sbjct 1120892 ATGTTGGCACCGTCCATGTAGACGAGACCACCATGCTCGTGAACAAGATCGCAGACTTGC 1120951 Query 138366 CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGT 138425 | || | | ||||| |||||| || || || || || | ||| ||| | || Sbjct 1120952 TTAATCTCGGGCTCAAAGACACCAAAGGTAGAGGGGTAGGTGACCATGATAGCAGCAAGC 1121011 Query 138426 TCAAATGTATTCATGATT-GCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA-T 138480 || || | || || || ||| || ||||| | ||||| | ||| ||| | Sbjct 1121012 TC----GTCAGCGTGCTTGGCACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGT 1121067 Query 138481 CAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538 | | | || ||||||||| || || ||||| || ||||| | || ||||| || Sbjct 1121068 CTTGCCGTCGCACTTGACAGTGACGACCTTCATACCAGCCATAGCAGCCGAGGCAGGGTT 1121127 Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || || || | || ||||| || || |||| Sbjct 1121128 GGTACCGTGGGCAGAAACAGGGATCAGGCAGACCTTTC 1121165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998211825520