Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 196 6e-45 >seq3 Length=7873615 Score = 196 bits (216), Expect = 6e-45 Identities = 1039/1637 (63%), Gaps = 43/1637 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| ||| Sbjct 1402629 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGGATCTGGGGTGACGATATTGAGCGTGT 1402688 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| || ||||| |||| | | ||| ||| || | || || | Sbjct 1402689 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCCACTTTG 1402746 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||| || ||||| ||| || ||| | || ||||||||| | | | |||||| Sbjct 1402747 TTCAACGCCGGTACCCCACAGCCTCAGCTCTCATCATGCTTCCTTGTTGATATGAAGGAG 1402806 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||| | || || | | ||||| || || ||| |||| Sbjct 1402807 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 1402866 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| | || ||| | | |||| | ||| || || || Sbjct 1402867 GGTGGTATTGGCTTAAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 1402926 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||||| || | |||||| |||| ||||| || || || ||| ||| || || || Sbjct 1402927 AATGGTACTTCCAACGGTATTGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 1402986 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| || |||| | || || |||| ||||| | || |||||| Sbjct 1402987 GTCGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGG 1403043 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | ||||||||||| | ||| ||||| || | || |||| || Sbjct 1403044 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAGGTCCGC 1403103 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | || || || | || ||||| || || |||||||||||||| || ||| | Sbjct 1403104 GCTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGG 1403163 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 || ||||| |||| | || || || || || || ||||| | ||| || Sbjct 1403164 AACGGCGAATGGACTCTCATGTGCCCCAACGAATGC-CCTGGTCTTGCTGACTGCTACGG 1403222 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA-GAGCCAATGCGACT 75859 ||| || ||||| || || ||| |||||| || ||| ||||||| | | | || | | Sbjct 1403223 TGACGAATTTGAGGCTCTGTACGAAAAGTACGA-GAGAGAGGGTAAGGGTC---GCAAGT 1403278 Query 75860 GTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || || | | | || | ||||| | || ||||| | | ||||| |||||||||| | Sbjct 1403279 CTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACTGGAAACC 1403338 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | ||||| ||||||||| || || ||||| ||||||||||| | || || | Sbjct 1403339 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCTTGGTACCA 1403398 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 || ||||| || || ||||| || || | || ||| | |||||| |||| Sbjct 1403399 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 1403458 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094 ||||||| | || || | | || || | ||| ||||||| || || | Sbjct 1403459 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGC---T 1403515 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 || | | || || || || |||| | ||||| | ||| | ||| ||| Sbjct 1403516 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCA 1403575 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | ||| || || || || | || || || || ||||| ||| |||| | Sbjct 1403576 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 1403635 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274 ||||| | ||||||||||||||||| |||| || || |||| | ||||| | Sbjct 1403636 TTGGTCTTGGTGTTCAAGGTCTCGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGT 1403695 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 | || || ||| |||| | ||||| || ||||| || || || |||| Sbjct 1403696 CTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCATGCTGCCCTTA 1403755 Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 || |||| || | || | | ||||| |||| || || ||||||| || Sbjct 1403756 CCACG-TCTGTGCAACTCGCCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGTTCCCCT 1403814 Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451 || || | || | || |||||||| |||| |||| || || || || | | | | Sbjct 1403815 GCCTCTGAGGGTATTCTCCAGTTTGACATGT-GGAATGTCAAGCC-CTCTGATCTTTGGG 1403872 Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511 | ||||| ||| || ||||| | ||| | || |||||||| | | | Sbjct 1403873 ATTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 1403932 Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571 | || ||||| || ||| ||| | || || | || || || || |||||||| || | Sbjct 1403933 CTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTTGAGCCTT 1403992 Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631 |||| | |||||||||| | || ||| || || ||||| |||||||| Sbjct 1403993 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 1404052 Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688 || |||| || || | || ||||| |||||| | | ||||||| | | || Sbjct 1404053 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 1404112 Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747 || ||| | | ||||| || || || ||| | | ||||| | || |||||| | Sbjct 1404113 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 1404168 Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807 || ||| || |||||||| || | | | || | | ||||| || || ||| Sbjct 1404169 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 1404228 Query 76808 GGTCGCTTCATTGATCA 76824 ||| |||||||||||| Sbjct 1404229 GGTGCCTTCATTGATCA 1404245 Score = 113 bits (124), Expect = 5e-20 Identities = 334/507 (66%), Gaps = 26/507 (5%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079 ||||||||| | ||||| || |||| | |||| || ||| ||||| || || Sbjct 2197200 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTCT---TCCTTTGCTCAG 2197144 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138 || ||| |||| ||||| || ||||||||||||||| ||| | || ||| | || Sbjct 2197143 CGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 2197085 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | ||| | |||||||| || |||||||| || || |||| || || || || ||||| Sbjct 2197084 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATTTC 2197025 Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258 || ||||||||||| ||| || |||||| || ||| || | || | || | Sbjct 2197024 TCGTGATGAGGGTCTTCACACTGACTTTGCC-TG--TCTCCTCCACTCTCACCTCAAGGG 2196968 Query 65259 AC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315 || ||| | | | ||||| | ||| | | || || ||| |||||| | | Sbjct 2196967 ACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGA 2196908 Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375 |||| || || || ||||| ||| ||| |||| |||||||| | ||| | Sbjct 2196907 GTTCCTCACCGAGGCTCTCCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCA 2196848 Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACCCA-----T 65429 |||||| || | || | ||||| |||||| || | | | || | | | Sbjct 2196847 GTACATCGAATTCGTCGCCGATCGCCTCCTC------GTGGCTCTCGGCAACGAGAAGGT 2196794 Query 65430 TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAA 65489 | || | | || || || ||||| ||||| ||||| ||||| || |||||||| Sbjct 2196793 GTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAA 2196734 Query 65490 CTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||| |||||||| |||| ||||| Sbjct 2196733 CTTCTTCGAGAAGCGCGTTGCTGACTA 2196707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569406114880