Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 4e-15
>seq1
Length=11834931
Score = 98.7 bits (108), Expect = 4e-15
Identities = 124/169 (73%), Gaps = 5/169 (3%)
Strand=Plus/Minus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||| || ||||||||||| ||||| || |||||||||||| ||||||
Sbjct 8675390 CTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGATAATGTC 8675331
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803
||| ||| || | | ||||||||||||| || | | | | ||| ||
Sbjct 8675330 AGGAGTCAGGCC---CTCTCTGCTGAAAGGCATATCCTCCTGTCGATAGGTAACACCGAT 8675274
Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAATGATTGGG 309852
|| ||||||||| |||| | ||||| |||||||||||||| |||||
Sbjct 8675273 TGTACCCTTTTGACCGTGACGAGAAGCGAACTTGTCACCAAT--TTGGG 8675227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951973749748528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |