Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 203 4e-47
>seq3
Length=7873615
Score = 203 bits (224), Expect = 4e-47
Identities = 1008/1585 (64%), Gaps = 45/1585 (3%)
Strand=Plus/Minus
Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583
||| ||||| || || || ||| |||||| || | ||||| | | ||| |||||
Sbjct 1404192 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 1404133
Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639
||| ||||| | ||| || || | | ||||||| | | |||||| ||||| |
Sbjct 1404132 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 1404077
Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699
| | || || |||| || |||||||| ||||| || || ||| ||
Sbjct 1404076 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 1404017
Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759
| |||||||||| | ||||| || |||||||| || || || || | || || |
Sbjct 1404016 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCG 1403957
Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819
||| ||| || ||||| || || | | |||||||| || | ||| | |||||
Sbjct 1403956 AGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 1403897
Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877
|| ||| ||||| || | | | || || || || |||| |||||||
Sbjct 1403896 CATCCTCTCGGAGGGGTTCCCAATCCCAAAGATCAGAG-GGCTTGACATTCC-ACATGTC 1403839
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
|||||| || | || | || || || ||||||| ||||| |||| ||||| |
Sbjct 1403838 AAACTGGAGAATACCCTCAGAGGCAGGGGAACCCTTGAAGGTGGAGTAGGGACCTTCCTC 1403779
Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996
| || | || ||||| || |||| || || || ||||| || ||||| |
Sbjct 1403778 CTTGGCGAGTTGCACAGA-CGTGGTAAGGGCAGCATGGTAGATGGTCTCGAAGATTTGCT 1403720
Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056
|||| ||| || || || ||||| | |||| || || |||| |
Sbjct 1403719 TGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAG 1403660
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
|||||||||||||||| | |||||| |||| ||| ||||| || || || || |
Sbjct 1403659 CGAGACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 1403600
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|| || || || ||| |||| ||| | ||| | ||||| | ||||
Sbjct 1403599 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGA 1403540
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233
|| || || || | | || | || || ||||||| ||| | || |
Sbjct 1403539 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCA 1403483
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
| | | || || | ||||||||||| |||||| | ||| || | || |
Sbjct 1403482 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 1403423
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| || || | |||||| || || || || | ||||||||||| ||||| ||||
Sbjct 1403422 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGC 1403363
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||||||||||| | || | || ||||| ||||| | | ||||| || |
Sbjct 1403362 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCAAGAATGGCGT 1403303
Query 111414 TCCAAA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470
||||| | || | | | || || | | || | ||| | ||||| ||||||||||
Sbjct 1403302 ACCAAAGCTTCTGAGCCTTGATAGACTTGC---GACCCTTACCCTCTCTCTCGTACTTTT 1403246
Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529
||| || || ||||| || ||||| ||| | ||||| || || || || ||
Sbjct 1403245 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGACCAGG-GCATTCGTTGGGG 1403187
Query 111530 CAGAAAAGAGACCATTGACC--ACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587
|| | |||| ||||| || ||| ||| || |||||||||||||| || || ||||
Sbjct 1403186 CACATGAGAGTCCATTCGCCGTTCCT--CTCGACACGCTTCATGAAAAGATCAGGGATCC 1403129
Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647
| || | || || || | | || |||| || | || ||||| ||| | |
Sbjct 1403128 AAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTTCCGTGGTTCTTTCGGAGAT 1403069
Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATC 111701
|||||||||| | || || ||||||||||||||||| |||| |||| || ||
Sbjct 1403068 CAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTC 1403009
Query 111702 CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761
||| | ||| | || | || || || || ||| ||| || || || ||||| |
Sbjct 1403008 GCTTGTTA---CCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGG 1402952
Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821
||| |||||| | || |||||| || || || ||| | |||| | |
Sbjct 1402951 GAACAATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTC 1402892
Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
||| || | |||||||| |||||| ||| || || ||||| | | || |
Sbjct 1402891 GGTGGGCGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGG 1402832
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | |||||||| | || ||||||||| | | | ||||||||| || | ||
Sbjct 1402831 TATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAGAGCT 1402772
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-- 111999
| || ||| ||||| || ||||| | || || | || ||| ||| | | ||||
Sbjct 1402771 GAGGCTGTGGGGTACCGGCGTTGAACAAAGTGGGGCTCGCATGAGTGA--AGAACTTGCT 1402714
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
||||| || |||||||||||||||| ||||| || || || ||| || | ||
Sbjct 1402713 TGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATCCCAACAGC 1402654
Query 112060 GACCCGCATGAACATGTACTGTGGG 112084
||| ||||||| ||| | ||| |||
Sbjct 1402653 GACTCGCATGATCATATGCTGCGGG 1402629
Score = 102 bits (112), Expect = 1e-16
Identities = 331/505 (66%), Gaps = 22/505 (4%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 2196707 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2196766
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || | | || | | | | || | | | || ||||
Sbjct 2196767 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCCAC------GAGG 2196820
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|| ||||| | || | || ||||||| ||| | |||||||| |||| ||
Sbjct 2196821 AGGCGATCGGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGA 2196880
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
||| ||||| || || || |||| | | |||||| ||| || || | | |||
Sbjct 2196881 GCACAAGGGAGAGCCTCGGTGAGGAACTCCTGCTCAATAGAAACGGCATCGGTGATAATG 2196940
Query 122605 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661
| ||||| | | | ||| ||| || | || | || ||| || ||||
Sbjct 2196941 TCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCA 2196997
Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721
|| || ||| ||||||||||| || ||||| || || || || |||| ||||| |||
Sbjct 2196998 AAGTCAGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTGGAAAAGCTCAGACCAGGC 2197057
Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACC 122780
||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||||
Sbjct 2197058 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 2197116
Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACC 122839
||| || ||||| |||| ||| || | || ||||| ||| ||| | | | ||
Sbjct 2197117 CTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGA-AGAGTTCTTGTCCTGGATCC 2197175
Query 122840 ATTTCATTGCCCATTTCGCCTTCTT 122864
|| || ||||| | |||||||||
Sbjct 2197176 ATCGGATGGCCCAATCCGCCTTCTT 2197200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031795889600
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