Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016- 07-14] 26 sequences; 37,070,975 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=8944178 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || ||||||||||| ||||||| || || || || | | Sbjct 2592072 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 2592013 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | || | || || | ||||| || ||||| ||||| || || || || || |||| Sbjct 2592012 CTGATACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGATC 2591953 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| || || | ||||||||| || | || || | ||| | || || |||| Sbjct 2591952 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCAGACTACA 2591893 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || || ||||||||||| | ||| | || | || | || ||||| || Sbjct 2591892 ATATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGCCTTCGTGGTGGTAT 2591841 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || ||||| || || | |||||| | || || | ||||| Sbjct 2591538 TGACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCCGACACTATCGACAACGTCAAGT 2591479 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||| ||||| || || || || || || || ||||| || || | |||||||| Sbjct 2591478 CCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGATTGATTTTCGCCGGCA 2591419 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || ||| | ||| | ||||| |||||||| || ||||| || ||| | | Sbjct 2591418 AGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTC 2591359 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214 | |||| | ||| | || ||||| Sbjct 2591358 ACCTGGTCCTTCGTCTTCGTGGTGG 2591334 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || ||||| || || | ||| Sbjct 2591842 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCATCC 2591783 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || || ||||| || || || || Sbjct 2591782 GACACTATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAG 2591723 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | || ||| | ||| | || || |||||| Sbjct 2591722 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCAGACTACAAC 2591663 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | || | || | || ||||| || Sbjct 2591662 ATTCAGAAGGAGTCAACCCTTCATCTCGTCCTCCGCCTTCGTGGTGGTAT 2591613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918258651520