Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 122 2e-22 >seq3 Length=7630574 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | || ||| | || ||| || | ||||||||| | | || ||| Sbjct 2145203 AGGAGTTCCTCACCGAGGCTCTCCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGA 2145144 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 ||||||||||||||||| ||||| ||| | | || || || || ||||||| |||| Sbjct 2145143 AGCAGTACATCGAATTCGTCGCCGATCGCCTCCTCGTGGCTCTCGGCAACGAGAAGGTGT 2145084 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| || | ||||| || | || |||||| ||| || ||| || |||||||||| Sbjct 2145083 ACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 2145024 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||| || |||||| |||| | | ||||| Sbjct 2145023 TCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 2144984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823945786520