Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 5e-11
>seq3
Length=7630574
Score = 82.4 bits (90), Expect = 5e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||||| | || ||||| || ||||| || || | || || | ||||| ||||
Sbjct 2145435 CGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATC 2145376
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||| ||||| ||| |||||||| || || |||||||||||| | |||
Sbjct 2145375 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATTTCT 2145316
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGT 22893
||||| || ||||| ||| ||||||||| |||
Sbjct 2145315 CGTGATGAGGGTCTTCACACTGACTTTGCCTGT 2145283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233582633612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |