Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 2e-15
>seq3
Length=7630574
Score = 96.9 bits (106), Expect = 2e-15
Identities = 202/297 (68%), Gaps = 8/297 (3%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252
|| || ||||| || ||||| ||| ||| ||||| ||||| |||| || || ||||
Sbjct 2210157 GATGCTTTCTATCGTTACAAGATGGAGCG--TCTGCAGACCAAGATCGAAGGCAAAGGAA 2210100
Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGGACGCCC 6310
||||||| || ||||| |||||||| | | | | || || | |||| || ||
Sbjct 2210099 ACGGTATCAAGACCGTTGTTGTCAACCT--CAGCAGTGTAGCAGCCTCACTCGCCCGTCC 2210042
Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370
| | ||||| | || || ||||| | ||||||||| ||||| || | |||| |
Sbjct 2210041 CGGCTCCTACGTCATCAAGTACTTCGGTTTCGAACTTGGTGCTCAAACCAACATTGACCC 2209982
Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430
||| |||| || | ||| | ||||| | || | || ||||||| ||||| ||
Sbjct 2209981 CAAGGACGACCGTTGGATCATCAACGGTGCCCACGATGCTCCCAAGCTCCAGGATCACCT 2209922
Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| ||||| || ||||||||| || || | ||| | ||||| ||||||||
Sbjct 2209921 CGATGGCTTCATCAACAAGTTTGTTCTCTGCAAAAAGTGCAAGAACCCCGAGACCGA 2209865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947183671324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |