Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-19 >seq1 Length=11717239 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | ||||| || |||||||| || ||||||||| | ||||||||| Sbjct 2985384 GGTAAGGAAGGTCGTCTCAGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 2985443 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| |||| || | ||| | || || ||||| |||| | ||| Sbjct 2985444 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCACGAGGTCGGTGTGCCTCGAAGTATC 2985503 Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || | || ||||||| | ||| | |||||| Sbjct 2985504 GCCAGAACCCTTACTTATCCCGAGACTGTAAC 2985535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780822201506824