Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 >seq2 Length=8818970 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || || |||||||| || | || || | | |||| || | || Sbjct 2563000 ATGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGAGAGGGTACGGCCATCCTCGAGCTG 2563059 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||| ||||| ||||| || || || || || || || ||||| || Sbjct 2563060 CTTGCCGGCGAAAATCAATCGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTT 2563119 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||| ||||| | || || || || || | || |||||||| Sbjct 2563120 GGACTTGACATTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGT 2563179 Query 101446 TAAAGTTTTTACAAATATCTGCATGGT 101472 || || || || || ||||||||||| Sbjct 2563180 CAAGGTCTTGACGAAGATCTGCATGGT 2563206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278380681428