Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 8e-16
>seq2
Length=8818970
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || || || |||||||| || | || || | | |||| || | ||
Sbjct 2563000 ATGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGAGAGGGTACGGCCATCCTCGAGCTG 2563059
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || ||||| ||||| ||||| || || || || || || || ||||| ||
Sbjct 2563060 CTTGCCGGCGAAAATCAATCGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGAATCTT 2563119
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | ||| ||||| | || || || || || | || ||||||||
Sbjct 2563120 GGACTTGACATTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGT 2563179
Query 101446 TAAAGTTTTTACAAATATCTGCATGGT 101472
|| || || || || |||||||||||
Sbjct 2563180 CAAGGTCTTGACGAAGATCTGCATGGT 2563206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278380681428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |