Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016-
08-12] 4 sequences; 36,178,456 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 196 6e-45
>seq3
Length=7630574
Score = 196 bits (216), Expect = 6e-45
Identities = 1039/1637 (63%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| |||
Sbjct 1350699 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGGATCTGGGGTGACGATATTGAGCGTGT 1350758
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||| |||| | | ||| ||| || | || || |
Sbjct 1350759 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCGAGCCCCACTTTG 1350816
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| ||| || ||| | || ||||||||| | | | ||||||
Sbjct 1350817 TTCAACGCCGGTACCCCACAGCCTCAGCTCTCATCATGCTTCCTTGTTGATATGAAGGAG 1350876
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| || || ||| ||||
Sbjct 1350877 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 1350936
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| | || ||| | | |||| | ||| || || ||
Sbjct 1350937 GGTGGTATTGGCTTAAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 1350996
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | |||||| |||| ||||| || || || ||| ||| || || ||
Sbjct 1350997 AATGGTACTTCCAACGGTATTGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 1351056
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622
|| | || ||| || |||| | || || |||| ||||| | || ||||||
Sbjct 1351057 GTCGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGG 1351113
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | ||||||||||| | ||| ||||| || | || |||| ||
Sbjct 1351114 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAGGTCCGC 1351173
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || | || ||||| || || |||||||||||||| || ||| |
Sbjct 1351174 GCTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGG 1351233
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| ||||| |||| | || || || || || || ||||| | ||| ||
Sbjct 1351234 AACGGCGAATGGACTCTCATGTGCCCCAACGAATGC-CCTGGTCTTGCTGACTGCTACGG 1351292
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA-GAGCCAATGCGACT 75859
||| || ||||| || || ||| |||||| || ||| ||||||| | | | || | |
Sbjct 1351293 TGACGAATTTGAGGCTCTGTACGAAAAGTACGA-GAGAGAGGGTAAGGGTC---GCAAGT 1351348
Query 75860 GTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| || | | | || | ||||| | || ||||| | | ||||| |||||||||| |
Sbjct 1351349 CTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACTGGAAACC 1351408
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || || ||||| ||||||||||| | || || |
Sbjct 1351409 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCTTGGTACCA 1351468
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | || ||| | |||||| ||||
Sbjct 1351469 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 1351528
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094
||||||| | || || | | || || | ||| ||||||| || || |
Sbjct 1351529 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGC---T 1351585
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || |||| | ||||| | ||| | ||| |||
Sbjct 1351586 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCA 1351645
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || | || || || || ||||| ||| |||| |
Sbjct 1351646 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 1351705
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
||||| | ||||||||||||||||| |||| || || |||| | ||||| |
Sbjct 1351706 TTGGTCTTGGTGTTCAAGGTCTCGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGT 1351765
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
| || || ||| |||| | ||||| || ||||| || || || ||||
Sbjct 1351766 CTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCATGCTGCCCTTA 1351825
Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| |||| || | || | | ||||| |||| || || ||||||| ||
Sbjct 1351826 CCACG-TCTGTGCAACTCGCCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGTTCCCCT 1351884
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451
|| || | || | || |||||||| |||| |||| || || || || | | | |
Sbjct 1351885 GCCTCTGAGGGTATTCTCCAGTTTGACATGT-GGAATGTCAAGCC-CTCTGATCTTTGGG 1351942
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
| ||||| ||| || ||||| | ||| | || |||||||| | | |
Sbjct 1351943 ATTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 1352002
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || ||||| || ||| ||| | || || | || || || || |||||||| || |
Sbjct 1352003 CTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTTGAGCCTT 1352062
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | |||||||||| | || ||| || || ||||| ||||||||
Sbjct 1352063 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 1352122
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688
|| |||| || || | || ||||| |||||| | | ||||||| | | ||
Sbjct 1352123 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 1352182
Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| ||| | | ||||| || || || ||| | | ||||| | || |||||| |
Sbjct 1352183 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 1352238
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| || |||||||| || | | | || | | ||||| || || |||
Sbjct 1352239 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 1352298
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 1352299 GGTGCCTTCATTGATCA 1352315
Score = 113 bits (124), Expect = 5e-20
Identities = 334/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Minus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079
||||||||| | ||||| || |||| | |||| || ||| ||||| || ||
Sbjct 2145492 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAAGAACTCT---TCCTTTGCTCAG 2145436
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138
|| ||| |||| ||||| || ||||||||||||||| ||| | || ||| | ||
Sbjct 2145435 CGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 2145377
Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198
| ||| | |||||||| || |||||||| || || |||| || || || || |||||
Sbjct 2145376 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATTTC 2145317
Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258
|| ||||||||||| ||| || |||||| || ||| || | || | || |
Sbjct 2145316 TCGTGATGAGGGTCTTCACACTGACTTTGCC-TG--TCTCCTCCACTCTCACCTCAAGGG 2145260
Query 65259 AC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315
|| ||| | | | ||||| | ||| | | || || ||| |||||| | |
Sbjct 2145259 ACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGA 2145200
Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375
|||| || || || ||||| ||| ||| |||| |||||||| | ||| |
Sbjct 2145199 GTTCCTCACCGAGGCTCTCCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCA 2145140
Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACCCA-----T 65429
|||||| || | || | ||||| |||||| || | | | || | | |
Sbjct 2145139 GTACATCGAATTCGTCGCCGATCGCCTCCTC------GTGGCTCTCGGCAACGAGAAGGT 2145086
Query 65430 TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAA 65489
| || | | || || || ||||| ||||| ||||| ||||| || ||||||||
Sbjct 2145085 GTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAA 2145026
Query 65490 CTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|||||| |||||||| |||| |||||
Sbjct 2145025 CTTCTTCGAGAAGCGCGTTGCTGACTA 2144999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569570171520
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