Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 4e-15 >seq1 Length=11717239 Score = 98.7 bits (108), Expect = 4e-15 Identities = 124/169 (73%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| ||||| || |||||||||||| |||||| Sbjct 8550918 CTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGATAATGTC 8550859 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 ||| ||| || | | ||||||||||||| || | | | | ||| || Sbjct 8550858 AGGAGTCAGGCC---CTCTCTGCTGAAAGGCATATCCTCCTGTCGATAGGTAACACCGAT 8550802 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAATGATTGGG 309852 || ||||||||| |||| | ||||| |||||||||||||| ||||| Sbjct 8550801 TGTACCCTTTTGACCGTGACGAGAAGCGAACTTGTCACCAAT--TTGGG 8550755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951974299961312