Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=11717239 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/150 (73%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 352851 TTGGAGACAAGTTCGCTTCTCGATCTGCTCAAAAAGGAACAATTGGAATGTTGCTCAGTG 352910 |||| ||||||||||||||||| | |||||| || ||||| || |||| | | | Sbjct 8550761 TTGGTGACAAGTTCGCTTCTCGTCACGGTCAAAAGGGTACAATCGG--TGTTACCTATCG 8550818 Query 352911 AAA--AGGATATGCCTTTCGACAAAAATGGCTTAAAACCTGACATTATTATTAATCCAAA 352968 | | |||||||||||||| || | | ||| | | ||||||||||| || || || | Sbjct 8550819 ACAGGAGGATATGCCTTTCAGCAGAGAGGGCCTGACTCCTGACATTATCATCAACCCTCA 8550878 Query 352969 TGCGATTCCCTCTAGAATGACAATAGCTCA 352998 || ||||| ||| | |||||||| || || Sbjct 8550879 CGCTATTCCGTCTCGTATGACAATTGCCCA 8550908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812739175844